Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2472 |
Symbol | |
ID | 4039295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2685804 |
End bp | 2686871 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977871 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_584618 |
Protein GI | 94311408 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.278486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.454857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG CAGTTCTGCC GGGCGATGGC ATCGGCCCCG AGATCGTTGC TGAAGCCGTC AAGGTGCTCA ACGCACTGGA CGAGAAATTC GAGATGGAAA CCGCGCCGGT CGGCGGCGCT GGCTACGAGG CCGAAGGCCA TCCGCTGCCA GACAACACGC TGAAGCTGGC CAAGGAAGCC GACGCCATCC TGTTTGGCGC CGTGGGCGAC TGGAAGTACG ACAGCCTGGA TCGCCCGCTG CGTCCCGAGC AGGCCATTCT CGGCCTGCGC AAGCATCTGC AGCTGTTCGC CAACTTCCGT CCGGCTATTT GCTACCCGGA ATTGACCGGC GCATCGAGCC TGAAGCCCGA ACTGGTGGCT GGCCTGGATA TCCTGATCGT GCGCGAGCTG AACGGCGACA TCTACTTCGG CCAGCCGCGC GGCGTGCGCG AGGCGCCGGA TGGCCTGTTC AAGGGTGCCC GCGAAGGCTT CGACACGATG CGCTACAGCG AGCCGGAAGT CCGCCGCATC GCGCATGTGG CGTTCCAGGC CGCTGCAAAG CGCGGCAAGA AGCTGTGCAG CGTCGATAAG GCCAACGTGC TCGAGACTTT CCAGTTCTGG AAAGACATCG TGATCGACGT CAGCAAGGAG TACCCGGACG TCGAGCTGTC GCACATGTAC GTGGACAACG CCGCGATGCA GCTGGTCAAG GCGCCGAAGA GCTTCGACGT GATCGTCACC GGCAACATGT TCGGTGACAT CCTGTCCGAC GAGGCTGCGA TGCTGACCGG TTCGATCGGC ATGCTGCCGT CGGCGTCGCT CGATGCCAAC AACAAGGGTC TGTATGAGCC GTCGCACGGC TCGGCGCCTG ACATCGCCGG CAAGGGCGTG GCGAATCCGC TGGCCACGAT CCTCTCCGCC GCGATGATGC TGCGCTATTC GCTGAACCGC GCCGAACAGG CTGACCGCAT CGAGAACGCT GTCAAGAAGG TGCTGGCCCA AGGCTATCGC ACGGCTGACA TCGTGACGCC GGGCTGCAAG CAGGTTGGCA CGCGCGAGAT GGGCGAGGCG GTGCTGGCGG CACTGTAA
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Protein sequence | MKIAVLPGDG IGPEIVAEAV KVLNALDEKF EMETAPVGGA GYEAEGHPLP DNTLKLAKEA DAILFGAVGD WKYDSLDRPL RPEQAILGLR KHLQLFANFR PAICYPELTG ASSLKPELVA GLDILIVREL NGDIYFGQPR GVREAPDGLF KGAREGFDTM RYSEPEVRRI AHVAFQAAAK RGKKLCSVDK ANVLETFQFW KDIVIDVSKE YPDVELSHMY VDNAAMQLVK APKSFDVIVT GNMFGDILSD EAAMLTGSIG MLPSASLDAN NKGLYEPSHG SAPDIAGKGV ANPLATILSA AMMLRYSLNR AEQADRIENA VKKVLAQGYR TADIVTPGCK QVGTREMGEA VLAAL
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