| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2469 |
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| Symbol | truA |
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| ID | 4039292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2680119 |
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| End bp | 2680955 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977868 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_584615 |
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| Protein GI | 94311405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.371859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGTGA ACCGCATCGC CATCGGCCTC CACTATGACG GCTCGGCCTA CTCCGGCTGG
CAGTCGCAGC CCCATCGCAA TACCGTGCAG GACCACCTCG AGGACGCGAT CGAGCGCTTC
GCAGGCGTGC GACTGCTGAC CACGGTAGCC GGGCGGACGG ATGCAGGTGT GCACGCGCTG
GGGCAGGTCA TCCACCTCGA CACCGAACTC GACCGCGACC GCTTTTCATG GGTTCGCGGC
GTCAACGCCT TCCTGCCTCC GTCGATCGCG CTGCAGTGGG CGGAGCCCGT CGACGAGAAC
TTCCACGCGC GCTTCCTGGC CTACGAGCGC ATGTATTACT ACGCGCTGTA CACGGGGCCG
CATCGCGCAC CGATGATTCA CGGCCGTGCC GGTTACCTGA TGCTGCCGCA CGGGCAGCGG
CTCGATACCG AGGCGATGCG CCGGGCGTCG GCATGTCTGC TCGGCGAACA TGATTTCTCG
GCGTTTCGCG CCGCCGAATG CCAGGCCAAG TCGCCCGTCA AGACGATGTA CGACGTGACG
ATCGAGGCGG ATGGCAACTG GGTGTTCCTG CGCTTCCGGG CCAGCGCCTT CCTGCACCAC
ATGGTGCGTA ACCTGATGGG CTGCCTCGTG GCGGTGGGGC GTGGCCGATA TCCTGCCGAG
TGGATGGCGG AAGTGCTGGA AGGGCGCAAT CGCCAGAAGG CCGCGCCAAC CTTCATGCCG
GACGGGCTCT ATCTGGTCGA CGTGAAGTAT CCTGAGCCAT ACCAGTTGCC CAAGGCGGAC
CCGGCCGCCA GCTTCTTCCA CGGAGTATTT GTCGATGACA GCCACGATGG CGCTTGA
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| Protein sequence | MPVNRIAIGL HYDGSAYSGW QSQPHRNTVQ DHLEDAIERF AGVRLLTTVA GRTDAGVHAL
GQVIHLDTEL DRDRFSWVRG VNAFLPPSIA LQWAEPVDEN FHARFLAYER MYYYALYTGP
HRAPMIHGRA GYLMLPHGQR LDTEAMRRAS ACLLGEHDFS AFRAAECQAK SPVKTMYDVT
IEADGNWVFL RFRASAFLHH MVRNLMGCLV AVGRGRYPAE WMAEVLEGRN RQKAAPTFMP
DGLYLVDVKY PEPYQLPKAD PAASFFHGVF VDDSHDGA
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