| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2460 |
|---|
| Symbol | |
|---|
| ID | 4039283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2670812 |
|---|
| End bp | 2672344 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637977859 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_584606 |
|---|
| Protein GI | 94311396 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0352966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.628087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTA TCGTCGGTGC GGTTTCCACC AGCCCTGTCA ATCAACTCAT CTATGACAGC
CTGCTGCTGT TGCAACACCG CGGACAGGAT GCAGCCGGCA TCGCCACGGC CAATGGCAGC
ACCTTTCACA TGCACAAGGC CAACGGCATG GTGCGTGACG TGTTCCGCAC GCGCAACATG
CGCAGCCTGC CGGGCACGTC GGGCATCGGC CAGGTGCGCT ACCCGACCGC CGGTTCCGCG
TCGAGCGAGG AAGAAGCACA GCCGTTCTAT GTGAACGCGC CGTACGGCGT CATCCTCGCC
CACAACGGCA ACCTGACCAA CTCGGAACAG TTGCGCGAGG AAATGTTCCG TCGCGATCGC
CGCCACATCA ACACGCATTC GGACTCCGAA GTGCTGCTGA ACGTGCTGGC CGACGAACTG
CAACGCGCCA GCAGCGGCAA CGAACTGGAC CCGGAGACAA TCTTCAAGGC CGTCGCGGGC
ATGCACCGCC GCGTCAAGGG TGCCTATGCG ATCACCGCGC AGATCGCCGG CTACGGCCTG
CTGGCCGTAC GCGATCCGTT CGGCATCCGC CCGCTGTGTA TTGGCAGCGT CGACACCCCG
ACCGGCAAGG AATACCTCAT CGCCTCGGAA TCCGTGGCCC TGGAAGGCAT CGGCTACCAG
ATGGAGCGCG ATGTGGCGCC GGGCGAGGCG ATTTTCATCG ACCTGGACGG CTCGTTCCAC
AGCAAGCAGT GCGCTGATAA TCCGGTGCTG ACGCCATGCA TCTTCGAGTA TGTCTATCTG
GCCCGTCCGG ATTCGTGCAT TGACGGCGTG CCGGTCTACG ATGCCCGCCT GCGCATGGGC
GACTACCTGG CCGAAAAGAT CCGCCGCGAA GTGCCGGCTG GCGATATTGA CGTGGTCATG
CCGATTCCCG ATTCGAGCCG CCCGGCCGCC ATGCAGGTGG CCAATGCGCT CGGCGTGCAG
TACCGCGAGG GCTTCTTCAA GAACCGCTAC GTGGGCCGTA CGTTCATCAT GCCGGGCCAG
GCAGTGCGCA AGAAGTCGGT GCGCCAGAAG CTCAATGCGA TGGGTGTCGA GTTCAAGGGC
AAGAACGTGC TGATCGTCGA CGATTCGATC GTCCGTGGTA CCACGTCGCT CGAGATCGTG
CAGATGGCGC GTGACGCAGG TGCGAAGAAG GTGATCTTCG CGTCGGCAGC GCCGCCGGTG
AAGTTCCCGA ACGTCTACGG TATCGACATG CCCACGCGTG CCGAACTGGT GGCCTATGGT
CGCACGGACG AAGAAGTGGC GCGCATGATC GGCGCCGACC AGCTCGTCTA CCAGGACGTG
GAAGCGATGA AGCAGGCTGT GCGCGACATC AACCCGAACC TGCGTGACTT TGATGCGTCG
TGCTTCGACG GCAAGTACGT TACCGGCGAT ATCGACGACG CCTATCTGGA GCGCCTCGAG
ACCGCGCGTA GCCTGGCCGA TCGTGAAGGC ACCAACGGCG GTGAAACCGA ACGTTCGCAG
CTGCATCTGC AGCGCTCGGG CGGCAACGAA TAA
|
|---|
| Protein sequence | MCGIVGAVST SPVNQLIYDS LLLLQHRGQD AAGIATANGS TFHMHKANGM VRDVFRTRNM
RSLPGTSGIG QVRYPTAGSA SSEEEAQPFY VNAPYGVILA HNGNLTNSEQ LREEMFRRDR
RHINTHSDSE VLLNVLADEL QRASSGNELD PETIFKAVAG MHRRVKGAYA ITAQIAGYGL
LAVRDPFGIR PLCIGSVDTP TGKEYLIASE SVALEGIGYQ MERDVAPGEA IFIDLDGSFH
SKQCADNPVL TPCIFEYVYL ARPDSCIDGV PVYDARLRMG DYLAEKIRRE VPAGDIDVVM
PIPDSSRPAA MQVANALGVQ YREGFFKNRY VGRTFIMPGQ AVRKKSVRQK LNAMGVEFKG
KNVLIVDDSI VRGTTSLEIV QMARDAGAKK VIFASAAPPV KFPNVYGIDM PTRAELVAYG
RTDEEVARMI GADQLVYQDV EAMKQAVRDI NPNLRDFDAS CFDGKYVTGD IDDAYLERLE
TARSLADREG TNGGETERSQ LHLQRSGGNE
|
|---|
| |