Gene Rmet_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2452 
Symbol 
ID4039274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2663304 
End bp2664407 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID637977850 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_584598 
Protein GI94311388 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000448665 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.628087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGA GCATTCCTAA CCCCGTGGCC GACGCGACCC ATCAGGCCGG CGGGAACCCT 
GGCGGTCAGC CGCTGGAAAT TGACGCGCTG ATCGTGGGCG CTGGCCCGGT CGGCCTGTTC
CAGGTCTTTG AACTGGGGCT GCTCGAAATC AAGGCACACA TCATCGACTC GCTCAAGGTA
GTGGGCGGCC AGTGCGTCGA GCTGTATCCG GACAAGCCGA TCTACGATAT CCCGGCCGTG
CCCATCTGCA CGGGCCAGGA ACTGACCGAC AACCTGCTGA AGCAGATCGA GCCGTTCTCG
CCGACGTTCC ATCTGGGTCA GGAAGTGAGC GTCGTGGAGC GCCGCGAAGA CGGCCGCTTC
TTCGTCGAAA CATCGCTTGG AACCCGCTTC ATCACCAAGA CCATCTTCAT CGCCGCCGGC
GTTGGCTCGT TCCAGCCGCG CACGCTGAAG GTGGAAGGCA TCGACAAGTT CGAAGGAAAG
CAGCTGTTCT ACCGCGTCAA GGATCCGAGC CGCTTCCACG GCCGCAATCT GGTCGTCGTC
GGCGGTGGTG ATTCGGCGCT GGACTGGACG CTGGATCTGG TGGGCAAGGC CGAGTCGGTG
GTGATGATCC ACCGCCGCGA TGGTTTCCGT GCCGCACCGG CATCGGTGGC CAAGATGCGC
GAGCTGTGCG AGCAGATGGA AATGCAATTC ATGGTCGGCC AGATCGGCGG CTATGAAGAG
AAGGATGGCG TGCTCACCGA GATCAAGGTG ACCGGCGCCG ACGGCGTGAC CCGCCGTATG
CCCGTCGACG ACATCCTCGT GTTCTTCGGC CTTTCGCCGA AGCTCGGCCC GATCGCCGAA
TGGGGCCTGG ACCTCGAGCG CAAGCAGATC AAGGTGGACA CCGAGAAGTT CGAGACGAAC
ATCCCGGGCA TCTTCGCGGT TGGCGACATC AACACCTACC CGGGCAAGAA GAAGCTGATC
CTGTCGGGCT TCCACGAAGC CGCGCTGGCT GCTTTCGGCG CCGCGCCGTA CATCTTCCCG
GACAAGAAGA TCCACATGCA GTACACGACG ACCTCGCCGA AGCTGCACAA GGTGCTTGGC
GTGGAGACGC CGGTTTTCGA CTGA
 
Protein sequence
MDLSIPNPVA DATHQAGGNP GGQPLEIDAL IVGAGPVGLF QVFELGLLEI KAHIIDSLKV 
VGGQCVELYP DKPIYDIPAV PICTGQELTD NLLKQIEPFS PTFHLGQEVS VVERREDGRF
FVETSLGTRF ITKTIFIAAG VGSFQPRTLK VEGIDKFEGK QLFYRVKDPS RFHGRNLVVV
GGGDSALDWT LDLVGKAESV VMIHRRDGFR AAPASVAKMR ELCEQMEMQF MVGQIGGYEE
KDGVLTEIKV TGADGVTRRM PVDDILVFFG LSPKLGPIAE WGLDLERKQI KVDTEKFETN
IPGIFAVGDI NTYPGKKKLI LSGFHEAALA AFGAAPYIFP DKKIHMQYTT TSPKLHKVLG
VETPVFD