| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2440 |
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| Symbol | |
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| ID | 4039262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2648903 |
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| End bp | 2652016 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977838 |
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| Product | RNAse E |
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| Protein accession | YP_584586 |
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| Protein GI | 94311376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.19566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TGCTGTTTAA CGCGACGCAA CAGGAAGAAC TGCGCGTCGC CATCGTCGAT
GGTCAGAAAC TGATCGACAT CGACATCGAA ACTGCCGGGC GCGAACAGCG CAAAGGCAAC
ATCTACAAGG GTGTCATCAC CCGGATCGAA CCCTCGCTGG AAGCGTGCTT CGTCAACTAC
GGCGAAGAGC GCCATGGCTT CCTGCCGTTC AAGGAAGTGG CGCGCGCCTT CTTCAAGGAC
GGCGTGGACG TGCGCAACGC GCGCATCCAG GACGCCCTGC ACGAAGGCCA GGAACTGATC
GTCCAGGTTG AGAAGGAAGA GCGCGGCAAC AAGGGCGCAG CCCTGACCAC GTTCATCTCG
CTTGCCGGCC GCTACCTGGT GCTGATGCCG AACAACCCGC GCGGTGGTGG CGTTTCGCGC
CGCATCGAGG GCGAAGACCG CCAGGAACTG CGCGAGACGA TGGCGCAGCT CCAGGTGCCG
GAAGGCATGA GCATCATCGC GCGCACCGCC GGTATCGGCC GTGCCGCCGA AGAACTGCAG
TGGGACCTGA ACTACCTGTT GCAGCTGTGG AAGGCCATCG ACGGCGCCGC CGGCGACAAC
AAGGCCCCGC TGCTGATCTA TCTGGAATCC AGCCTCGTGA TCCGCGCGAT CCGCGACTAC
TTCCAGCCCG ATATCGGCGA AATCCTGATC GATACCGACG AGATTTATGA GCAGGCCCGC
GCCTTCATGA GCGTGGTCAT GCCGGACAAC ATGAGTCGCG TGAAGAAGTA CCGCGACGAC
GTGCCGCTCT TCTCGCGCTT CCAGATCGAG CACCAGATCG AATCGGCCTA CTCCCGCATG
GTGATGCTGC CGTCGGGTGG TGCCATCGTG ATCGACCACA CCGAAGCCCT CGTTTCCGTC
GACGTGAACT CGGCCCGCGC CACCAAGGGT GCGGACATCG AGGAAACCGC GCTGCGCACC
AACCTGGAAG CGGCCGACGA AATCGCCCGC CAGCTGCGCC TGCGCGACCT TGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAGTCC GGCAAGGCCC AGAAGGATGT GGAAACGCGC
CTGAAGGATG CGCTGCGCCA CGACCGCGCC CGCGTGCAGA TGGGCAAGAT CAGTCGTTTC
GGCCTGATGG AGCTGTCGCG CCAGCGCCTG CGTCCGTCCC TGTCCGAAGG CTCGCATATC
ACCTGCCCGC GCTGCAACGG CACGGGCCAC ATCCGCGATA CCGAATCGTC CGCCCTGCAG
GTGCTGCGCA TCATCCAGGA AGAGGCGATG AAGGAAAACA CGGCCGCCAT CCACTGCCAG
GTGCCGGTGG AAGTGGCCGC TTTCCTGCTG AACGAAAAGC GTCAGGAAAT CAACCTGATC
GAGTTGCGCT TCAAGGTCAA CGTGCTGCTG ATCCCGAACA AGCACCTCGA AACGCCGCAT
TACAAGCTCG AGCGCCTGCG CCACGACGAT CCGCGCCTGG AAGAATCGAC CGCCAGCTAC
CGCATGGCCG AGGCTGCCGC CAAGGAACTC GAGGCCGACA CGAGCTACAG CAGCCGCAAG
AAGGAAGAAA CGCGTCCGCG TCAGGAAGCG GCCGTCAAGG GCATCACGCC CGACGCGCCG
GCTCCGGTTT CGGTGCCGCG CCCTGAGCGC GTGCGCCCGG AGGCGCCTGC GGCGCGCCCC
GCACCGGCAA CCCAGCCGGT GGCCAGCGGC GGTTTCATTG CCTGGCTCAA GGGCCTGTTC
GGCGCCAAGC CGGCCACGCC GCCCGAGGCA CCGGCAAAGC CGGCAGCCGA AACCCCGTCG
CGCGGTGGTG AAGGCCGCCG CGAGCGCGGT CAACGCGGCG AAGGCCGTGG TGAAGGCCGT
GAGGGACGCG AAGGTCGTGA AGGTCGCGAG GGCCGTGGCC AGCGCGGCGA GCGTGGCGAA
CAGCGCGGTG ACCGTCAGGG TCGTGGCCAG CGTGGTGAAC GCAGCGAGCA GCAACGCGGC
GAACAACGTG AGCAGCGTGA GCCGCGTGAG CAACGTGGCG AACGCCCTGC ACGCGCGCCT
CGCGAAGGCC AGGCCACCCC GGCAATCGCC CAGCCGGAAC GTGCCGAGGC ACGCCAGGAA
GGCCGCCGCG AGCGCAGCCA GGAACGCCGC GAGCGTCAGC GCGAGCGTCA ACGCGAGCGC
AATGAGGCCC GCGAGACCGA TGAGGCACTG AGCACCGAAG CGCCGCAGTT GGCCGTCGGC
GCCGCCCAGG TAGCGCCAGT CGCCGCAGCC GCCGCAGCCG CCGCAGCCGC CGCAATGGTC
GCCGTGACCA CGGAAGCAGA CACCACAGAA CTGCCGGCTG GCGTGGAAGG TGCCGAGACC
GGTGAAGGCG AAGAACGCCG TCGCCGCAAT CGTCGCGGCC GCAACCGCTA TCGCCGCGAC
CGTGATGACA CTGCGCAAAA TGCCGAAGGT ATTGACGGCG ACGAAGCCAA TCTGGCCGAA
GTCAGCGCAG GCGTGACGGA ATCGGAATCT GAGTCGACTG GCTTCCAGCC CGCTGTTGCC
GAGGCCGATG AAAGCGTCAA GGCTGTCGAA ACGGCCGTGG CGGTGACGCC GGCGGAAGTG
GCCCCAGCAG CACCGGTCGC TCCGGTAGCC CCGGTGGCAT CCGAGCCCGT CTTCGCAGCC
GTGGCCGAGC CGCAAGCGGC GCCGGTAGTG ACGCCCGCTC CGGTCGAGAC TGCGCCGGTG
GTAGCCGCTC CCGTGGCAGC TGCTCCGGTG ATTTCGGAAC CTGTCATCGC CACGCCGGAC
GTCGCGCCGG CCCCGGTTGC AGCCCCGGTT GCAGCCCCGG TTGCAGCCCC GGTTGCAGCC
CCGGTTGCAG CCGTGGTGGA AACCGTGGCA GTCGTATCGG CCGCAACGCA GGTGACCGCC
GCGCCAAGCG CCGAGAACCT GGAGCCGATG CTGGCTGCGG CTGGCCTGGA GTGGGTCCGT
ACGGACGGCG ACAAGCACCG CGCCGCACAG GAAGCCGCTT CGCAGATCGT GCCGGCACCG
CGCGTGCCGC GTGAGCGCAA GCCGCTACCG CCGCTGCCGG AAGGCCCGAT GGTTCTGGTC
GAGACCGGTG GCGTACAGCA AGCCGCTGCA CAGCAACAGC AGCAACAGCA GTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVITRIE PSLEACFVNY
GEERHGFLPF KEVARAFFKD GVDVRNARIQ DALHEGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGEDRQEL RETMAQLQVP EGMSIIARTA GIGRAAEELQ
WDLNYLLQLW KAIDGAAGDN KAPLLIYLES SLVIRAIRDY FQPDIGEILI DTDEIYEQAR
AFMSVVMPDN MSRVKKYRDD VPLFSRFQIE HQIESAYSRM VMLPSGGAIV IDHTEALVSV
DVNSARATKG ADIEETALRT NLEAADEIAR QLRLRDLGGL IVIDFIDMES GKAQKDVETR
LKDALRHDRA RVQMGKISRF GLMELSRQRL RPSLSEGSHI TCPRCNGTGH IRDTESSALQ
VLRIIQEEAM KENTAAIHCQ VPVEVAAFLL NEKRQEINLI ELRFKVNVLL IPNKHLETPH
YKLERLRHDD PRLEESTASY RMAEAAAKEL EADTSYSSRK KEETRPRQEA AVKGITPDAP
APVSVPRPER VRPEAPAARP APATQPVASG GFIAWLKGLF GAKPATPPEA PAKPAAETPS
RGGEGRRERG QRGEGRGEGR EGREGREGRE GRGQRGERGE QRGDRQGRGQ RGERSEQQRG
EQREQREPRE QRGERPARAP REGQATPAIA QPERAEARQE GRRERSQERR ERQRERQRER
NEARETDEAL STEAPQLAVG AAQVAPVAAA AAAAAAAAMV AVTTEADTTE LPAGVEGAET
GEGEERRRRN RRGRNRYRRD RDDTAQNAEG IDGDEANLAE VSAGVTESES ESTGFQPAVA
EADESVKAVE TAVAVTPAEV APAAPVAPVA PVASEPVFAA VAEPQAAPVV TPAPVETAPV
VAAPVAAAPV ISEPVIATPD VAPAPVAAPV AAPVAAPVAA PVAAVVETVA VVSAATQVTA
APSAENLEPM LAAAGLEWVR TDGDKHRAAQ EAASQIVPAP RVPRERKPLP PLPEGPMVLV
ETGGVQQAAA QQQQQQQ
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