| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2422 |
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| Symbol | |
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| ID | 4039244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2631803 |
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| End bp | 2633308 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977820 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_584568 |
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| Protein GI | 94311358 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.320344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCA GATCTCCAGC CCTGGCAAGG GTCGTGGTCA TGGTGGCCAT GCTCGTGTTC
GGTCCGGCTG TTTCCGAATT GGGGCACGCT CAGGCGGCGG CCCAGAACTA CAACCTGCCC
GACTTTACCG ACTTGGTCGA GAAGGTGAGC CCGGCGGTTG TGAATATCCG CACGACAGAG
CGCGTGCGCT CGCGTGGCGG CAATTCCCCC GATGACGACG AAATGGCGGA GTTCTTCCGT
CGCTTCTTCG GCGTGCCAAT GCCCGGAACG CCGGGACAGC CGCGCCGTGG CCAGCCTCCG
CAAGGACAGG GCCAAAGTCA GGGGCAGGGC GAAGAGATGA GCCGGGGCGT GGGTTCCGGT
TTCATCATCA GCCAGGATGG CTACGTGATG ACGAACGCCC ACGTGGTGGC AGAGGCTGAC
ACGATCTACG TGACGCTGCC TGACAAGCGC GAATTCAAGG CCAAGCTGAT TGGTGCGGAC
AAGCGTACCG ACGTGGCGCT GCTCAAGATC GATGCAACGG GTCTGCCACG CCTGCCACTC
GGGGATTCGG ACAAGGTCCG CACTGGCGAG TGGGTATTGG CCATTGGTTC GCCGTTCGGC
CTGGACAGCA GCGTGACCGC CGGTATCGTA TCGGCTAAGG CGCGCGACAC CGGCGACTAC
CTGCCGCTTA TCCAGACTGA CGTGGCGGTG AACCCTGGTA ATTCGGGTGG CCCGCTGATC
AACCTGCGCG GCGAAGTCAT CGGCATTAAT TCGCAGATCT ACAGCCGCAG CGGCGGTTAT
ATGGGCATTT CGTTCGCGAC CCCGATCGAC GAAGCGATGC GTGTGACCGA GCAACTGAAG
GCGACTGGCA AGGTGACGCG TGGGCGGATC GCCGTGGCGA TCGGTGATGT GACCAAGGAA
GTGGCGGACT CGCTGGGCCT TGGGCGCACT CGCGGCGCGC TGGTTGGTAG CGTCGAGCCG
GGCGGTCCTG CCGAAAAGGC CGGTATCGAG GCGGGCGACA TCATCCTGAA GTACAACGGC
CGGGATATTG AGAAGGCTGC GGATCTGCCG CGGATGGTCG GTGACACCAA GCCGGGTACG
CGCGTGCCGA TGCAGGTGTG GCGCAAGGGG CAGACCCGCG AGGTAATGAT CACGGTGGCG
GAGCTTGAGC CCGACACCCC TCGCGCCACG CCGCGCCGCG GCGACAAGCG CGGCGGAGGT
AACGAAGAGG CACCCGCGCC GAAGCCGAAT GCACTGGGCC TGATCGTCAA CGACATCCCC
GAGGCGCGGA TGCGCGAGCT CAAGCTGAAG TCAGGGGTGG AGGTCGACAC GGTTGATGGT
CCGGCCGCTC GCGCCGGGAT CCGTCCGGGC GACATCATCC TGCGACTCGG TGATACCGAC
GTGACCAGTG CGAGGCAGTT CAACGATCTC GTCAAGGGAC TGGACAAGAA CAAGATGGCT
GCCGTGTTCG TGCGCCGCGG CGATGCTACC CAGGTGCTGA CGCTGCGTCC CAATCAGACG
CGCTGA
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| Protein sequence | MISRSPALAR VVVMVAMLVF GPAVSELGHA QAAAQNYNLP DFTDLVEKVS PAVVNIRTTE
RVRSRGGNSP DDDEMAEFFR RFFGVPMPGT PGQPRRGQPP QGQGQSQGQG EEMSRGVGSG
FIISQDGYVM TNAHVVAEAD TIYVTLPDKR EFKAKLIGAD KRTDVALLKI DATGLPRLPL
GDSDKVRTGE WVLAIGSPFG LDSSVTAGIV SAKARDTGDY LPLIQTDVAV NPGNSGGPLI
NLRGEVIGIN SQIYSRSGGY MGISFATPID EAMRVTEQLK ATGKVTRGRI AVAIGDVTKE
VADSLGLGRT RGALVGSVEP GGPAEKAGIE AGDIILKYNG RDIEKAADLP RMVGDTKPGT
RVPMQVWRKG QTREVMITVA ELEPDTPRAT PRRGDKRGGG NEEAPAPKPN ALGLIVNDIP
EARMRELKLK SGVEVDTVDG PAARAGIRPG DIILRLGDTD VTSARQFNDL VKGLDKNKMA
AVFVRRGDAT QVLTLRPNQT R
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