| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2421 |
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| Symbol | |
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| ID | 4039243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2629762 |
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| End bp | 2631555 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637977819 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_584567 |
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| Protein GI | 94311357 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.417593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.344469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACA TTCGTAATTT CTCGATCATT GCCCACATCG ACCATGGTAA ATCCACCTTG
GCCGACCGGA TCATTCAGCG CTGTGGCGGG CTGTCCGATC GCGAAATGGA AGCGCAGGTG
CTCGATTCGA TGGATATCGA GAAGGAGCGG GGCATCACGA TCAAGGCCCA GACCGCCGCG
CTGAGCTACA AGGCGCGCGA CGGCCAGGTC TACAACCTGA ATCTGATCGA TACGCCGGGA
CACGTCGACT TCAGCTACGA AGTCAGCCGC TCCCTGTCCG CATGCGAAGG CGCGCTGCTA
GTGGTTGACG CCTCGCAGGG CGTGGAAGCC CAGACCGTTG CCAATTGCTA CACGGCCATC
GAACTGGGCG TCGAAGTCGT GCCCGTGCTG AACAAGATCG ATCTGCCGCA GGCCGACCCG
GCCAATGCGA TCCAGGAGAT CGAGGACGTG ATCGGCATCG ACGCACAGGA CGCTACACCG
TGCTCGGCCA AGACTGGCCA GGGCGTGGAA GACGTGATCG AGGCGCTGAT CGCCAAGGTT
CCGCCCCCCA AGGGTGACGC CGCCGCGCCT CTACAGGCGC TGATCATCGA TTCCTGGTTC
GACAACTACG TTGGCGTGGT GATGCTGGTG CGCGTGGTCA ACGGCACGCT TCGCCCCAAG
GACAAAGTTC TGCTGATGGC CACCGGCGCC CAGCATCTGG TGGAGCAGGT CGGTGTGTTC
TCGCCGAAGT CGATCCAGCG AGATGAGCTG ACGGCGGGGC AGGTGGGTTT CGTGATTGCG
GGCATCAAGG AGCTGAAGGC AGCCAAGGTT GGCGACACGA TCACCACTAT GACGCGCCGC
GCCGAAGCGC CGCTGCCGGG CTTCAAGGAA GTCAAGCCGC AGGTGTTCGC GGGGCTGTAC
CCTGTGGAAT CGAATCAGTA CGAGGCCCTG CGCGAATCGC TCGAGAAGCT GCGTCTGAAC
GATGCATCGC TGCAGTTCGA GCCGGAAGTC TCGCAGGCAC TCGGCTTTGG TTTCCGCTGC
GGCTTCCTGG GTCTGTTGCA CATGGAGATC GTGCAGGAGC GTCTGGAGCG TGAATTCGAC
ATGGACCTGA TCACGACCGC GCCGACCGTG GTCTATCAGG TTCAGCAGCG TGATGGCACG
GTGTTGACCG TCGAGAACCC GGCCAAGATG CCAGATCCGA GCAAGATCGA AGCCATTCTC
GAGCCGATCG TCACGGTCAA CCTGTACATG CCGCAGGATT ATGTCGGCTC GGTGATGACG
CTGTGCACGC AGAAGCGGGG CGCGCAGATC AATATGAGCT ATCACGGCAA GCAAGTGCAG
CTCACGTACG AGATCCCGAT GGCGGAAATC GTGATGGATT TCTTCGATCG CCTGAAGTCG
GTATCGCGCG GCTACGCATC GATGGATTAC GAGTTCAAGG AATACCGGCA GTCGGATGTG
GTGAAGGTGG ATATCTTGAT CAACAGCGAC AAGGTCGATG CCTTGTCCGT GATCGTGCAC
CGTTCAAACT CGCAGTATCG CGGTCGCGAG GTGGCGGCCA AGATGCGCGA GATCATCCCG
CGTCAGATGT ACGACGTGGC CATCCAGGCC GCCATCGGCT CGAATATCAT CGCGCGCGAG
AACGTGAAAG CGCTGCGCAA GAACGTGCTG GCCAAATGCT ACGGCGGCGA TATCAGCCGG
AAGAAGAAGC TGCTGGAAAA GCAGAAAGCA GGCAAGAAGC GGATGAAGCA GGTGGGGACC
GTCGAAATTC CGCAGGAGGC CTTCCTGGCG ATCCTGCAGG TGGACGACAA GTAA
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| Protein sequence | MDHIRNFSII AHIDHGKSTL ADRIIQRCGG LSDREMEAQV LDSMDIEKER GITIKAQTAA
LSYKARDGQV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAI
ELGVEVVPVL NKIDLPQADP ANAIQEIEDV IGIDAQDATP CSAKTGQGVE DVIEALIAKV
PPPKGDAAAP LQALIIDSWF DNYVGVVMLV RVVNGTLRPK DKVLLMATGA QHLVEQVGVF
SPKSIQRDEL TAGQVGFVIA GIKELKAAKV GDTITTMTRR AEAPLPGFKE VKPQVFAGLY
PVESNQYEAL RESLEKLRLN DASLQFEPEV SQALGFGFRC GFLGLLHMEI VQERLEREFD
MDLITTAPTV VYQVQQRDGT VLTVENPAKM PDPSKIEAIL EPIVTVNLYM PQDYVGSVMT
LCTQKRGAQI NMSYHGKQVQ LTYEIPMAEI VMDFFDRLKS VSRGYASMDY EFKEYRQSDV
VKVDILINSD KVDALSVIVH RSNSQYRGRE VAAKMREIIP RQMYDVAIQA AIGSNIIARE
NVKALRKNVL AKCYGGDISR KKKLLEKQKA GKKRMKQVGT VEIPQEAFLA ILQVDDK
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