| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2415 |
|---|
| Symbol | |
|---|
| ID | 4039237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2624948 |
|---|
| End bp | 2625730 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637977813 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_584561 |
|---|
| Protein GI | 94311351 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.240881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTCC ACGCGAACCC CGGTGTCATA GACCTCGGGG TCAATATCGA CCACGTGGCC
ACGCTGCGCA ACGCGCGCGG CACGGTGTAT CCCGATCCGA TCCAGGCAGC GCTGCAGGCC
GAGGAGGCCG GCGCCGACCT GATCACGCTG CATCTGCGCG AGGACCGTCG CCATATCCGC
GACGCCGACG TGCGCGCGCT GCGCCCGAAG TTGGCCACGC GCATGAATCT GGAATGTGCG
ATCACTTCCG AGATGCTCGA CATTGCGTGC GAGATCAAGC CCCAGGACGT CTGCCTGGTG
CCCGAGAAGC GCGAGGAAGT TACCACCGAA GGCGGACTCG ATGTAGCGGG CCATTTCGAG
CAAGTCAGCG CCGCATGCCG GCAACTGGCC GACGCGGGTA TCCGTGTATC GCTGTTCATT
GATGCTGACC CTGACCAAAT TGCCGCCGCT GCCGCGTGCA AGGCGCCGGT AATTGAAATC
CATACTGGCC GCTACGCCGA TGCGCATACG GCGGAGGAGC AGGCAGCCGA GTTCCGCCGT
GTAGCGGCGG GCGTGGAAGC GGGGCAGAAG CATGGTCTGA TCGTCAACGC CGGCCACGGC
CTGCACTACA CCAACGTGCA GCCGATTGCT GCGCTGCCGG GGATCAAGGA GCTCAACATT
GGTCACGCGA TCGTTGCCCA TGCGGTGTTT GCCGGGTGGC AGAACGCCGT GCGCGAGATG
AAGGCCATCA TGGTGGCGGC GCGCCTCGGT ACCCGTTACC CGGTTCCGGG TCAGCCCGCG
TGA
|
|---|
| Protein sequence | MIFHANPGVI DLGVNIDHVA TLRNARGTVY PDPIQAALQA EEAGADLITL HLREDRRHIR
DADVRALRPK LATRMNLECA ITSEMLDIAC EIKPQDVCLV PEKREEVTTE GGLDVAGHFE
QVSAACRQLA DAGIRVSLFI DADPDQIAAA AACKAPVIEI HTGRYADAHT AEEQAAEFRR
VAAGVEAGQK HGLIVNAGHG LHYTNVQPIA ALPGIKELNI GHAIVAHAVF AGWQNAVREM
KAIMVAARLG TRYPVPGQPA
|
|---|
| |