Gene Rmet_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2413 
Symbol 
ID4039235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2623456 
End bp2624505 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID637977811 
Productbeta-hexosaminidase 
Protein accessionYP_584559 
Protein GI94311349 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.096401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA AAGTCTCCGG CAAGCGGCCG GGCCCGGTAG TGCTCGACGT CGTGGGCAAG 
GAACTCACCG CCGACGATGC GCGTCGCATT GCCCACCCGT TGACGGGTGG CGTGATCCTG
TTTGCGCGCA ACTTCGAATC GCGCGCGCAA CTGGTGGCGC TGACGCGGGC CATTCGTGAA
GTCCGCGACG ATGCGCTCAT CTGCATCGAC CATGAAGGTG GCCGCGTGCA GCGCGCCAAA
ACCGATGGCT TCACGCACCT GCCGGCGATG TCCCGGCTTG GGGCGCTGTG GGACCGTGAC
GTGCTGGCTG CCACCAAAGT GGCGATGGCT TGCGGCTACG TGCTGGCGGC CGAACTGCGT
GCATGCGACA TCGACCTGAG CTTCACCCCG GTGCTAGACC TCGACTATGG CCGCAGTGGT
GTCATTGGCG ATCGTGCGTT CCATGCCGAT CCTCGTGTAG TGACCATGCT GGCCAACCAT
CTGACGCACG GACTGCTGCT GGCCGGCATG GCCAACTGCG GCAAGCACTT CCCGGGGCAT
GGCTATGTCG AAGCCGATTC GCATGTGGCC ATTCCGGTGG ACGAGCGCGG TCTTGATGAA
ATCCTGTCCC AGGACGCCCG TCCCTATGAC TGGATGGGCC CGGCGCTAGC GTCTGTGATG
CCTGCCCACG TGATCTACCC GACCGTCGAT CCGAGCCCTG CGGGCTTCTC GCGCTACTGG
CTGCAGGACA TCCTGCGGAC CCAGCTTGGT TTTGAGGGCG TGATTTTCAG TGACGACCTC
AGCATGGAGG GCGCGAGCGT GGCCGGTACC GTTACCCAGG CCGCACGTGC CGCGCTCGAG
GCGGGTTGCG ACATGGTGTT GATCTGCAAC CATCCGGATC GCGCGGACCA GCTTTTGAAT
GAACTCGATG TGTCGATCGG CAAGGCCTCG CAGCGGCGCA TCCGCAAGCT GTTCGGTCGC
CGCAAGCCGC TGGACTGGAA CAAGTTGCAG CAAGAAGGCG AATACCGCGC CGCGCTGCGC
CTGCTGAAGG AACACGATCT TATCGCTTGA
 
Protein sequence
MNKKVSGKRP GPVVLDVVGK ELTADDARRI AHPLTGGVIL FARNFESRAQ LVALTRAIRE 
VRDDALICID HEGGRVQRAK TDGFTHLPAM SRLGALWDRD VLAATKVAMA CGYVLAAELR
ACDIDLSFTP VLDLDYGRSG VIGDRAFHAD PRVVTMLANH LTHGLLLAGM ANCGKHFPGH
GYVEADSHVA IPVDERGLDE ILSQDARPYD WMGPALASVM PAHVIYPTVD PSPAGFSRYW
LQDILRTQLG FEGVIFSDDL SMEGASVAGT VTQAARAALE AGCDMVLICN HPDRADQLLN
ELDVSIGKAS QRRIRKLFGR RKPLDWNKLQ QEGEYRAALR LLKEHDLIA