| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2405 |
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| Symbol | |
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| ID | 4039225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2614650 |
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| End bp | 2616089 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977801 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_584551 |
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| Protein GI | 94311341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000242595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000044189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCACTAT CGATTGATCA TCGCAACCGA TGGGCGCGCT TGCGCTTCTC GGTCATTGGC
CCTTTGCTGG CTTCGCCGCC TGCCAAAGGA GAATTGCAGC AAGCGTTCCA GGCACTGGCC
GCCAAGGTCT GGCGGCACCC CATCACCGGC GCCGACGTTC AGTTCGGCGC GTCTTCCATC
GAACGCTGGT ATTACCGGGC CCGTCACGTC CAGGATCCGG TCGATCAACT CAAGAACCGA
CTGCGCGACG ATTGCGGCCA CTTCGTCAGT CTGAGCCCAG CCATCATCGA AGCGCTGGTC
GAGCAGTACC GTCAGCACCC CGGCTGGACC ATGCAGTTGC ATTACGACAA CCTGCGCGTC
GCGACCAAGG ATGGCCCGGA CACGCTGCCG TCCTACACCA CGGTGTGCCG GTATCTGAAG
GCGCAGGGTC TGGTGCGCAA GCCAACCCCG CGCTCGAGCA CGGATGGGGC CATCGCTGCT
GCGGCTCGCC GCGAGGCACG CGAGGTGCGT AGCTACGAGG TCGACCACGT GGCCGCGCTC
TGGCACCTGG ACTTCCACCA TGGTTCGCGC AAGGTGCTCA CCCCCGATGG GCAGTGGCAC
AAGCCGCTGC TGCTCTGCAT TATGGACGAC CATTCGCGGC TGGTCTGCCA CCTGCAGTGG
TTCCTCGACG AGACCACTGC CTCGCTGGTG CACGGCGTCT CGCAGGCGAT CATGAAGCGA
GGGCTGCCGC GGGCCATCAT GACCGATAAC GGCGCAGCCA TGATGGCCGA CGAGTTCGTC
GAGGGGCTGG CCAGTCTGGG CATCCTGCAC CAGACTACCT TGCCCTACAG CCCATACCAG
AATGCCAAGC AGGAACGCTT CTGGGGACAG CTCGAGTCCC GGCTGATGGC CATGCTCGAA
GGTGAGTCGC ACCTCACCCT GGAGCAATTG AACCTCGCCA CGCAGGCCTG GGTCGAGCAG
GAATACCACC ACAAGGAACA CGCCGAACTC GAGGCGACGC CTCTGCAGCG CTACCTGTCC
TGTGCCGACG TCTCGCGCCC CAGTCCCGAG GCGCTGGCCT TGCGCCGGGC CTTCCGTATC
CGCCAGCATC GCCGCCAGCG CAGAACCGAC GGCACCTTCA CGTTGGACGG CGTGCGCTTC
GAGATCCCCG GCGCTTACCG CCACCTCGAG CAAGTCTGCC TGAGCTACGC GCGCTGGGAT
CTCTCCCAAG TCGACCTGAT CGATGCGCGC ATCGGCGCGA TCCTGGCCGC CGTGTTCCCG
CTGGACAAGT CTGCCAATGC CGACGCACGG CGCGCGCATC TCACGGCCAA GGGTGCCTCG
CCTGCTAACG AGGAACCCGC GCAGGCTGGC ACTGCGCCGC TGCTGCGTCA GTTGCTCGCC
GAACACGCCG CCACCGGCCT GCCGCCGGCC TATCTCCCAC CCGCACCCAC CAAGCTATGA
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| Protein sequence | MSLSIDHRNR WARLRFSVIG PLLASPPAKG ELQQAFQALA AKVWRHPITG ADVQFGASSI
ERWYYRARHV QDPVDQLKNR LRDDCGHFVS LSPAIIEALV EQYRQHPGWT MQLHYDNLRV
ATKDGPDTLP SYTTVCRYLK AQGLVRKPTP RSSTDGAIAA AARREAREVR SYEVDHVAAL
WHLDFHHGSR KVLTPDGQWH KPLLLCIMDD HSRLVCHLQW FLDETTASLV HGVSQAIMKR
GLPRAIMTDN GAAMMADEFV EGLASLGILH QTTLPYSPYQ NAKQERFWGQ LESRLMAMLE
GESHLTLEQL NLATQAWVEQ EYHHKEHAEL EATPLQRYLS CADVSRPSPE ALALRRAFRI
RQHRRQRRTD GTFTLDGVRF EIPGAYRHLE QVCLSYARWD LSQVDLIDAR IGAILAAVFP
LDKSANADAR RAHLTAKGAS PANEEPAQAG TAPLLRQLLA EHAATGLPPA YLPPAPTKL
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