| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2393 |
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| Symbol | |
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| ID | 4039213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2603212 |
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| End bp | 2604093 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977789 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_584539 |
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| Protein GI | 94311329 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00681412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000021772 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATCG TTTTCCTGAC TCTGGCGTCG GTGCTCGTGG GAGGCGTCTC GATATGGCTT
TCTTTCGTTC TCTGGCGAGG GGGACATGGT GCGAGCGACC AAGTTGCCCC TGAAAGCGTG
AACGTCGCGG TACTGCGCGA TCAATGGGCG GAGTTGGAGA GAGACCACAT CAATGGCACG
TTGTCGGCCA ATGAATTGGC CGATGCAAGA TCTGATCTTC AGCGGCGAGC GCTGAATGAA
ACTGCTGCTC CTCCGTTGAA ATTGGGGCCG CCTGCTGGAA GCAAGCGGGC AGCGATCACT
GTCGCCATTC TGCTGCCGAT CGCGACAGCG CTCACCTATT CGTACCTGGG AAATCCGGCC
GCCACGGACC CGTCACAGGT TCGCAGCGCG AGCATGACGA CGCAAACCGA TGTGCAAGCA
ATGGTGGCCT CTCTTCAGGC ACGGCTGGCC CAGCACCCCG ATGATCCTGG AGGCTGGCTC
ATGCTGGCGC GTTCCTACCG TTACTTCGGC GATCATGAGC AAGCCGTCAA TGCCTTCACC
CACGCCAATG AGCTGGTCCA GAACGATCCA CAGGCGTTGG CGGAGTACGC GGAGTCGCTG
TCCAGAATCC GTGGCTCCGG TTTTGAGGGA GAGCCCACTC GTCTGCTTGA GCGCGCCTTG
TCGCTCGATC CCAATGCAGC CCTGCCTCTG ACTCTGGCCG GCGCTGCTGC GGTGCAGCGC
CGGGACTATC AAACGGCCAT CGCGCACTGG GAGAAGCTGC TCGGGATGAT GCCCCCCGAT
TCCGAGGCGG CGAAAGTCGT CGCGGCCGGG ATTGAACGGG CCCGGACGGA GCAGGCGGAA
CTCGCCCATG GTCGATCACC AGAGCCAAGC GCAAAGCCTT GA
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| Protein sequence | MSIVFLTLAS VLVGGVSIWL SFVLWRGGHG ASDQVAPESV NVAVLRDQWA ELERDHINGT
LSANELADAR SDLQRRALNE TAAPPLKLGP PAGSKRAAIT VAILLPIATA LTYSYLGNPA
ATDPSQVRSA SMTTQTDVQA MVASLQARLA QHPDDPGGWL MLARSYRYFG DHEQAVNAFT
HANELVQNDP QALAEYAESL SRIRGSGFEG EPTRLLERAL SLDPNAALPL TLAGAAAVQR
RDYQTAIAHW EKLLGMMPPD SEAAKVVAAG IERARTEQAE LAHGRSPEPS AKP
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