Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2389 |
Symbol | |
ID | 4039209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2599831 |
End bp | 2600277 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977785 |
Product | CcmE/CycJ protein |
Protein accession | YP_584535 |
Protein GI | 94311325 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000465809 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000169604 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGCCAC GAAATAGACG CATCGCACTC ATCGTCGCCG GGCTATCCGC CCTCGGCATC GCCACCGCGC TGGTGCTCAA TGCCTTTCAG AGCAACCTTG TGTTCTTCTT CACGCCCTCG CAGGTCAGTG CCGGGGAGGC ACCACTGGAG CGCACCTTTC GAGTCGGCGG CATGGTGGAA CGAGGTAGTC TGAAGCGCCA GCGTGGTGAG CTTGCCGTGC AGTTCGTCAT CACCGATACG GTCAAAGCAA TCCCGGTCAC GTATTCGGGC ATCTTGCCTG ACCTGTTCAG TGAAGGAAAA GGGGTGGTTG TTCAAGGACG GCTGGACAGT GCCGGCCTCT TTCGCGCCGA GGAGGTGCTG GCCAAGCACG ACGAGAACTA CATGCCGCCC GAGGCCCAGC ATGCGCTGGA CGAAGTCCAG AAGAAGCCGG CTTCAAGGAA GCCTTGA
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Protein sequence | MKPRNRRIAL IVAGLSALGI ATALVLNAFQ SNLVFFFTPS QVSAGEAPLE RTFRVGGMVE RGSLKRQRGE LAVQFVITDT VKAIPVTYSG ILPDLFSEGK GVVVQGRLDS AGLFRAEEVL AKHDENYMPP EAQHALDEVQ KKPASRKP
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