Gene Rmet_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2389 
Symbol 
ID4039209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2599831 
End bp2600277 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID637977785 
ProductCcmE/CycJ protein 
Protein accessionYP_584535 
Protein GI94311325 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000465809 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000169604 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGCCAC GAAATAGACG CATCGCACTC ATCGTCGCCG GGCTATCCGC CCTCGGCATC 
GCCACCGCGC TGGTGCTCAA TGCCTTTCAG AGCAACCTTG TGTTCTTCTT CACGCCCTCG
CAGGTCAGTG CCGGGGAGGC ACCACTGGAG CGCACCTTTC GAGTCGGCGG CATGGTGGAA
CGAGGTAGTC TGAAGCGCCA GCGTGGTGAG CTTGCCGTGC AGTTCGTCAT CACCGATACG
GTCAAAGCAA TCCCGGTCAC GTATTCGGGC ATCTTGCCTG ACCTGTTCAG TGAAGGAAAA
GGGGTGGTTG TTCAAGGACG GCTGGACAGT GCCGGCCTCT TTCGCGCCGA GGAGGTGCTG
GCCAAGCACG ACGAGAACTA CATGCCGCCC GAGGCCCAGC ATGCGCTGGA CGAAGTCCAG
AAGAAGCCGG CTTCAAGGAA GCCTTGA
 
Protein sequence
MKPRNRRIAL IVAGLSALGI ATALVLNAFQ SNLVFFFTPS QVSAGEAPLE RTFRVGGMVE 
RGSLKRQRGE LAVQFVITDT VKAIPVTYSG ILPDLFSEGK GVVVQGRLDS AGLFRAEEVL
AKHDENYMPP EAQHALDEVQ KKPASRKP