Gene Rmet_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2378 
Symbol 
ID4039198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2589414 
End bp2590262 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID637977774 
Productcytochrome c, class I 
Protein accessionYP_584524 
Protein GI94311314 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000643985 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000202689 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGTCG GTGCGGACGG CTACTACCTC CCGCCTGCGG AGGATGACAT TCCGAAAGGA 
CCCTATGGCG ATGCCATCCG GCGAGGAATG AAAATCTTCA CCGACACTGG CGCCATGGTC
AAAGACCACG TGGGCAATTC GCTGGCCTGC GCGAACTGCC ACCTCGACTC GGGACGGCGA
GAGAATGCCG CACCGATGTG GGCGGCCTAT GCGTCCTACC CCGCTTTTCG CAGCAAGACC
GGGACCATCA GCACGCTCGA AGACCGGATC ATGGGCTGTT TCACCTATTC GATGAACGCC
CAGGCGTCGT CCTCCGGGAA ACCGCCGCCC GCTGGCAGCG ATGTGTACCG CGATCTCATG
ACCTATATGG CCTGGATGGC CGATGGGCTG CCCGCCGGCA ACAAGCCGCG CGGAGCGCTC
TATCCCAAGG TGCCGAAACC AAAGGACGAC TACGACGTGG GCCGAGGTCT GGCGGTCTAT
CAACAAAATT GCGCACTGTG CCATGGTCCT GATGGACAGG GCACGCGGGA GGAAAACGGC
AAGATGAGAT TTCCCCCGCT TTGGGGACCC GAGTCGTACA ACTGGGGCGC CGGCATGGCC
CGCATCGATA CTGCAGCGGG CTTTATCTGG GCGAACATGC CGCTTGGAAA GCCATACAGT
CTGACAGAAC AGGAGGCCTG GGACGTGGCG GCATTCATCA ACAGCCACGA ACGCCCCAAG
GACACACGCC AGACCGGAAC CGTGGCTGAG GCGCTGGAGA AATACCACGA AGGTGAGCAA
AGCTACTACG GGAAGGTCGT GGGCGGAAAA CTGCTTGGGG TTGGAACGGA TGCCAAGAGC
GGACCGTAG
 
Protein sequence
MPVGADGYYL PPAEDDIPKG PYGDAIRRGM KIFTDTGAMV KDHVGNSLAC ANCHLDSGRR 
ENAAPMWAAY ASYPAFRSKT GTISTLEDRI MGCFTYSMNA QASSSGKPPP AGSDVYRDLM
TYMAWMADGL PAGNKPRGAL YPKVPKPKDD YDVGRGLAVY QQNCALCHGP DGQGTREENG
KMRFPPLWGP ESYNWGAGMA RIDTAAGFIW ANMPLGKPYS LTEQEAWDVA AFINSHERPK
DTRQTGTVAE ALEKYHEGEQ SYYGKVVGGK LLGVGTDAKS GP