Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2378 |
Symbol | |
ID | 4039198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2589414 |
End bp | 2590262 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977774 |
Product | cytochrome c, class I |
Protein accession | YP_584524 |
Protein GI | 94311314 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000643985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000202689 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCGTCG GTGCGGACGG CTACTACCTC CCGCCTGCGG AGGATGACAT TCCGAAAGGA CCCTATGGCG ATGCCATCCG GCGAGGAATG AAAATCTTCA CCGACACTGG CGCCATGGTC AAAGACCACG TGGGCAATTC GCTGGCCTGC GCGAACTGCC ACCTCGACTC GGGACGGCGA GAGAATGCCG CACCGATGTG GGCGGCCTAT GCGTCCTACC CCGCTTTTCG CAGCAAGACC GGGACCATCA GCACGCTCGA AGACCGGATC ATGGGCTGTT TCACCTATTC GATGAACGCC CAGGCGTCGT CCTCCGGGAA ACCGCCGCCC GCTGGCAGCG ATGTGTACCG CGATCTCATG ACCTATATGG CCTGGATGGC CGATGGGCTG CCCGCCGGCA ACAAGCCGCG CGGAGCGCTC TATCCCAAGG TGCCGAAACC AAAGGACGAC TACGACGTGG GCCGAGGTCT GGCGGTCTAT CAACAAAATT GCGCACTGTG CCATGGTCCT GATGGACAGG GCACGCGGGA GGAAAACGGC AAGATGAGAT TTCCCCCGCT TTGGGGACCC GAGTCGTACA ACTGGGGCGC CGGCATGGCC CGCATCGATA CTGCAGCGGG CTTTATCTGG GCGAACATGC CGCTTGGAAA GCCATACAGT CTGACAGAAC AGGAGGCCTG GGACGTGGCG GCATTCATCA ACAGCCACGA ACGCCCCAAG GACACACGCC AGACCGGAAC CGTGGCTGAG GCGCTGGAGA AATACCACGA AGGTGAGCAA AGCTACTACG GGAAGGTCGT GGGCGGAAAA CTGCTTGGGG TTGGAACGGA TGCCAAGAGC GGACCGTAG
|
Protein sequence | MPVGADGYYL PPAEDDIPKG PYGDAIRRGM KIFTDTGAMV KDHVGNSLAC ANCHLDSGRR ENAAPMWAAY ASYPAFRSKT GTISTLEDRI MGCFTYSMNA QASSSGKPPP AGSDVYRDLM TYMAWMADGL PAGNKPRGAL YPKVPKPKDD YDVGRGLAVY QQNCALCHGP DGQGTREENG KMRFPPLWGP ESYNWGAGMA RIDTAAGFIW ANMPLGKPYS LTEQEAWDVA AFINSHERPK DTRQTGTVAE ALEKYHEGEQ SYYGKVVGGK LLGVGTDAKS GP
|
| |