| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2375 |
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| Symbol | |
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| ID | 4039195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2586172 |
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| End bp | 2587728 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637977771 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_584521 |
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| Protein GI | 94311311 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000274948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000294452 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGAAA GCCTAGGGTT TCTCCTTGCT CTGAGCTTTA TCGTCTCGCT GGCGGCTCTG
GGCGCGTTGA TCTGGTCCAT CGTGACGCGC CAGATCCATG CGGGAAAGAA GGAGGCTTCG
ACCATATTTC TGGAGGGCGA GGCCGGCTCC CCGGATGATC CATCTTCATT CGATGAAGGG
GCGGCCGAGC ATCGATTCGA CGCCTTGCGT GCCGGCGTCG ACGCCCCGGG TCGGAACGTC
GTACTGGTCC TGTCCATCGC TTCCTTCCTG TTCCTGATCG TTGGCTCGCT GTTCGGGATG
ATCGCCTCGC TGAAGTTGCA CTGGCCCGAC TGGCTGGCGA GTCAGGCGTT CACCACCTTC
GGGCGCGCGC GCACCGTCCA TCTGAATCTG GTCGCGTACG GCTGGCTGTC CACAGGGGGC
ATAGCGGTCG CGCTCTGGAT CATCCCTCGC ATGTTTCATA CGCCCCTGCG AAGGCCCGCA
ATGGCGATGG TGGGCGCGGT GCTGTGGGCC CTCGGCGTGG CGGCCGGTGC CATTGCCATT
GCCAATGGAT GGAGCGACGG CCTGGAGTGG CTCGAAATCC CATGGCAGAT CGACATCGTC
CTGGCCCTCG GCGGCTTCTT CATCGCATGG TCCGCCATCG CGACGACCCG AAAACGCAAC
GTTCACCACA TCTACGTCAG CGGCTGGTAC TACCTCGCGG GACTGGCATG GTTCCCCATT
CTGTTCTTCA TCGCGAATAT CCCGGGCCTG CATTCAGGCG TGCAGCAAGC CACCACCAAC
TGGTGGTTCG CGCATAACGT GCTTGGCCTC TGGCTGACAC CGCTGGGGCT GGGTGCTGCC
TATTACCTGA TTCCCAAGAT CATCGGCAAG CCGATCTATT CGTATAGCGT TTCGCTGCTG
GGCTTCTGGG GCCTTGCCTT GTTCTACAGC CAGGTGGGTA TTCATCACCT GATCGGTGGG
CCCGTGCCGA CGTGGGTGGT CACGCTGTCG ATCGTGCACA GCGTCATGAT GTTCATTCCT
GTCATCGCGG TGGCGATCAA TCAGCACGTG ACGGTCGCGC AGAATTTCTG GGCGTTCAAG
GAGTCCATGG CGCTGCGCTT CGTGTCCACG GGCGCATTGA TGTACACGGC CGCATCCTTC
CAGGGATCGC TGGAGGCTGT ACGGGCCATC AACTCGATCA CCCACTTCAC GCACTACACG
GTGGGGCATG CGCACCTGGG AGCTTACGCA TTCGTCTCCA TCGTGCTGTT CGGCGCCTTC
TACTATCTCT TGCCCTACCT GACGGGCAAG AACTGGCCCT GTCCGCGACT CATCGCCATC
CACTATTGGC TGACGGTCCT GGGTTTTCTG ATCTATTTCC TGTCATTGAC CATCGGCGGT
TTCCTGCAAG GCATGTCGCT GCTCGATCCA CAGACCAGTT TCGCTGACAT CACCCGCAAC
ATCGTGCCGT ATCTCGAAGG TCGATCGGTG GGCGGCGGCA TGATGACGCT GGGACACTTC
GTCTTTGCCT TCCATGCGAT GGCCCTACTC TGGTCGAAAC GGCGAGGTGA CGCATGA
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| Protein sequence | MNESLGFLLA LSFIVSLAAL GALIWSIVTR QIHAGKKEAS TIFLEGEAGS PDDPSSFDEG
AAEHRFDALR AGVDAPGRNV VLVLSIASFL FLIVGSLFGM IASLKLHWPD WLASQAFTTF
GRARTVHLNL VAYGWLSTGG IAVALWIIPR MFHTPLRRPA MAMVGAVLWA LGVAAGAIAI
ANGWSDGLEW LEIPWQIDIV LALGGFFIAW SAIATTRKRN VHHIYVSGWY YLAGLAWFPI
LFFIANIPGL HSGVQQATTN WWFAHNVLGL WLTPLGLGAA YYLIPKIIGK PIYSYSVSLL
GFWGLALFYS QVGIHHLIGG PVPTWVVTLS IVHSVMMFIP VIAVAINQHV TVAQNFWAFK
ESMALRFVST GALMYTAASF QGSLEAVRAI NSITHFTHYT VGHAHLGAYA FVSIVLFGAF
YYLLPYLTGK NWPCPRLIAI HYWLTVLGFL IYFLSLTIGG FLQGMSLLDP QTSFADITRN
IVPYLEGRSV GGGMMTLGHF VFAFHAMALL WSKRRGDA
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