Gene Rmet_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2345 
Symbol 
ID4039165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2559404 
End bp2559787 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content72% 
IMG OID637977741 
Producthypothetical protein 
Protein accessionYP_584491 
Protein GI94311281 
COG category 
COG ID 
TIGRFAM ID[TIGR01690] integrative conjugative element protein, RAQPRD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000024781 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000135076 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTGGCTT CGATCTGGCT GCGCGCCGCG CATCGCGGCG TGCCCACTTT TCTCGTGACG 
GCCCTCCTGC TGGGTCAGTC CCAGATGGCC TTGGCCGAGT CTCCGGCACA GCGCCAGGAG
CTGGTCGCCG CACTGCGCCA GCTCGACGCG CTGGAGCGCA CCGTCGCGGA CAGCGCCGCG
CATGCCCCCA TCCAGCCGGG CGAGCGCTAC CACTTCGACT ACCCGCGGCT GCTGGCTGAC
CTGGCGCGCG TTCGCGCCGG CATCCAGTTT CACCTGACGC CATCGCGCGC TCAGCCGCGC
GACCCCTCCG AACTGGCCGG CGACTACCGC ACCGAGCGGG CGGCCGAGCC GCTGCCGGCG
ACGACTGCGG GGGGCAAGCA ATGA
 
Protein sequence
MVASIWLRAA HRGVPTFLVT ALLLGQSQMA LAESPAQRQE LVAALRQLDA LERTVADSAA 
HAPIQPGERY HFDYPRLLAD LARVRAGIQF HLTPSRAQPR DPSELAGDYR TERAAEPLPA
TTAGGKQ