Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2344 |
Symbol | |
ID | 4039164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2558730 |
End bp | 2559200 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637977740 |
Product | excisionase/Xis, DNA-binding |
Protein accession | YP_584490 |
Protein GI | 94311280 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000412399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000144936 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACCACCG CCACTGCCCA ATCCAAGATG ACCCTTCCCG CCGCGGGAGA GGTTAAGGCA GCCGTCCAGG GTCAACGTGC CTTGGCGGCT TACCTCGCAA CCCAGTTCGA GACGCAGCAC ATCCAGATCT TTGATGACCA CAAACAGGCT CATCAGGTGG AACTGCCTAC CTCGGCTTTA CGCCTGCTGG TCGACATCCT GGCCGAGTTG GCCGATGGCA ATGCAGTAAA GGTGGTGCCC GTCCATGCAG AGCTGACGAC CCAAGAGGCG GCGGACTTGC TCAACGTGTC CCGTCCCCAT TTCGTCAAGC TGCTAGAAGA TGGGGTGTTG GCATTTCATC GCACCGGCAA GCACCGCAGG GTGAGGTTCG CCGATCTGAT GCAGTACAAG GAAGCGCGCG AGCGCGCCAG TGAGCAGGCG ATGGCCGAAC TCGCTCAGCA GTCGCAAGAG TTGGGAATGG GATACGAATG A
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Protein sequence | MTTATAQSKM TLPAAGEVKA AVQGQRALAA YLATQFETQH IQIFDDHKQA HQVELPTSAL RLLVDILAEL ADGNAVKVVP VHAELTTQEA ADLLNVSRPH FVKLLEDGVL AFHRTGKHRR VRFADLMQYK EARERASEQA MAELAQQSQE LGMGYE
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