| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2340 |
|---|
| Symbol | |
|---|
| ID | 4039160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2555360 |
|---|
| End bp | 2556262 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637977736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584486 |
|---|
| Protein GI | 94311276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000406719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000155562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGA TCGATGAAGC TTTTCGCAAG TTCAAGTCGC GTCTGGAACT CAACGAACGC
GAACAGAAGA ATGCCTCGCA ACGCCAGAAC GAAGTGCGGG ACTACCTGCA GACCAAGTTC
GGCATTGCGC GCAGCTTCCT GACCGGTTCC TATGCTCGAT ACACGAAGAC GAAGCCGCTC
AAGGATATCG ACATCTTCTT CGTGCTGAAG GACTCGGAGA AGCATTACCA CGGCAAGGCC
GCATCGGTAG TGCTGGATGA TTTCCACTCT GCATTGGTGG AGAAATACGG TTCGGCGGCC
GTGCGCAAAC AGGCGCGCTC GATCAACGTG GATTTCGGTG TTCACATCGA CGCGGAGGAC
AACACGGACT ACCGGGTGGT CAGCGTGGAT GCGGTGCCCG CATTCGATAC CGGCGACCAG
TATGAGATCC CCGATACGGC GTCCGGAAAG TGGATCAAGA CGGACCCGGA GATCCATAAG
GACAAGGCGA CCGCAGCGCA CCAAGCCTAT GGCAATGAGT GGAAAGGTCT CGTGCGCATG
GTGAAGTACT GGAACAACAA TCCCAAGCAC GGCGATCTGA AGCCGGTGAA GCCCTCGTTC
CTGATCGAGG TAATGGCCCT TGAGTGTCTT TACGGCGGCT GGGGAGGATC GTTCGATCGC
GAGATCCAGT CGTTCTTTGC CACGCTTGCC GATCGAGTTC ATGACGAGTG GCCGGATCCC
GCCGGACTTG GCCCGGCGAT CAGCAACGAT ATGGATGCCG CGCGCAAGCA GCGCGCGCAG
CAGCTGCTGT TCCAGGCGAG CCAAGACGCA AGCATCGCCA TCGACCACGC GCGTCGTGGT
CGCAATATCG AAGCGCTTCG CGCCTGGCGC GCACTGTTTG GCCCCAAGTT CCCACTGTCC
TGA
|
|---|
| Protein sequence | MLSIDEAFRK FKSRLELNER EQKNASQRQN EVRDYLQTKF GIARSFLTGS YARYTKTKPL
KDIDIFFVLK DSEKHYHGKA ASVVLDDFHS ALVEKYGSAA VRKQARSINV DFGVHIDAED
NTDYRVVSVD AVPAFDTGDQ YEIPDTASGK WIKTDPEIHK DKATAAHQAY GNEWKGLVRM
VKYWNNNPKH GDLKPVKPSF LIEVMALECL YGGWGGSFDR EIQSFFATLA DRVHDEWPDP
AGLGPAISND MDAARKQRAQ QLLFQASQDA SIAIDHARRG RNIEALRAWR ALFGPKFPLS
|
|---|
| |