Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2304 |
Symbol | |
ID | 4039125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2526140 |
End bp | 2526640 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977702 |
Product | signal peptidase II |
Protein accession | YP_584452 |
Protein GI | 94311242 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000504038 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000155189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAAC CATCTCTTCG CAAGACGCAG TGGTACTCAC TCGCGATCGT TATATTCGCC GGCGATCAGG CAGCTAAGAG CTACATTGAC GCGACAACTC CCTTGGGTTG GTCGCACGAG GTGGCGTCAT TCTTCAACCT AGTTCACGCT CTCAATCCCG GCGCGGCGTT CAGCTTCCTT GCTGGCGCGG GCGGCTGGCA GCGGTGGTTT TTTCTGGCGA TCGCGTTCGC AATATCGGCA TGGCTCGCAT GGCTGCTCTC CCGGCCGCTG CGCAAAACGG AAGGCCTTTC GTACAGCCTC ATTCTGGGCG GCGCATTGGG CAACGCGTTC GACCGCGCCA CGCGCGGGCA CGTTATCGAC TACATCGACT TTCACCTGCA CGGCTGGCAC TGGCCCGCCT TCAACATCGC TGACATGGCC ATCGTGGGCG GGGCGATCGC GCTGGTGGCC CAGTCGTTCA TGAGCGTGGA GAACCCGGCC GCCACAAAGG AGTCCCAGTG A
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Protein sequence | MDEPSLRKTQ WYSLAIVIFA GDQAAKSYID ATTPLGWSHE VASFFNLVHA LNPGAAFSFL AGAGGWQRWF FLAIAFAISA WLAWLLSRPL RKTEGLSYSL ILGGALGNAF DRATRGHVID YIDFHLHGWH WPAFNIADMA IVGGAIALVA QSFMSVENPA ATKESQ
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