Gene Rmet_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2304 
Symbol 
ID4039125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2526140 
End bp2526640 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID637977702 
Productsignal peptidase II 
Protein accessionYP_584452 
Protein GI94311242 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000504038 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000155189 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGAAC CATCTCTTCG CAAGACGCAG TGGTACTCAC TCGCGATCGT TATATTCGCC 
GGCGATCAGG CAGCTAAGAG CTACATTGAC GCGACAACTC CCTTGGGTTG GTCGCACGAG
GTGGCGTCAT TCTTCAACCT AGTTCACGCT CTCAATCCCG GCGCGGCGTT CAGCTTCCTT
GCTGGCGCGG GCGGCTGGCA GCGGTGGTTT TTTCTGGCGA TCGCGTTCGC AATATCGGCA
TGGCTCGCAT GGCTGCTCTC CCGGCCGCTG CGCAAAACGG AAGGCCTTTC GTACAGCCTC
ATTCTGGGCG GCGCATTGGG CAACGCGTTC GACCGCGCCA CGCGCGGGCA CGTTATCGAC
TACATCGACT TTCACCTGCA CGGCTGGCAC TGGCCCGCCT TCAACATCGC TGACATGGCC
ATCGTGGGCG GGGCGATCGC GCTGGTGGCC CAGTCGTTCA TGAGCGTGGA GAACCCGGCC
GCCACAAAGG AGTCCCAGTG A
 
Protein sequence
MDEPSLRKTQ WYSLAIVIFA GDQAAKSYID ATTPLGWSHE VASFFNLVHA LNPGAAFSFL 
AGAGGWQRWF FLAIAFAISA WLAWLLSRPL RKTEGLSYSL ILGGALGNAF DRATRGHVID
YIDFHLHGWH WPAFNIADMA IVGGAIALVA QSFMSVENPA ATKESQ