Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2299 |
Symbol | |
ID | 4039120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2521023 |
End bp | 2521658 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977697 |
Product | cation efflux protein |
Protein accession | YP_584447 |
Protein GI | 94311237 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000556065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000107938 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTGAAA ACCACAGAAA TCACGAAAAC GACGAGTTGG GCCGCCTAGA TGCGAGCGAT GCGAAGGACC GAAAGATTCT TCTGACTGTG TTGCTGATCA ACCTGACGCA GTCCGCCGCC GGCATTGCCC TTGGCATCTG GGCTGGCTCT ACGGCGCTGA TGGGCGCCGG GTTGGACAAC CTCGCCGATG CGTCGGTCTA TGCGGTTAGC CTGTATGCCG TCGGTCGTGC GGCAACGGTC AAGGTGGGCG CGGCCCGCTT GTCGGGTTTC TTGCTAATCG GCCTGGCCGC GCTGCTGCTG TTGGAAGTCC TACGCCGCTT CGCTGGAGGG GAAGAGCCTG TCGGCCCAGC CATGATGGCC ATGGCCGCGC TGAACGCGGC TTTGAACCTA GTGTGCCTCA GACTACTGCG CCGCCATCGC GGGGAAGATG TGAACTTCAA GGCGTCAGCG ATCTTTACCA GCAACGACTC CATCGTCAAT GGTGCGATTG TGCTGTCCGG GGTGCTGGTG ATGGGGTTCG GGTCGAACAT CCCGGATCTG GTGCTGGGCG TCATCGTGGC CGCAATCGCA GCGAATGGGG GGCGGGAAAT CCTGCGCGAA GCATCGGAAA CAGCTCGCCG TAAGGCGGGC ACATAA
|
Protein sequence | MAENHRNHEN DELGRLDASD AKDRKILLTV LLINLTQSAA GIALGIWAGS TALMGAGLDN LADASVYAVS LYAVGRAATV KVGAARLSGF LLIGLAALLL LEVLRRFAGG EEPVGPAMMA MAALNAALNL VCLRLLRRHR GEDVNFKASA IFTSNDSIVN GAIVLSGVLV MGFGSNIPDL VLGVIVAAIA ANGGREILRE ASETARRKAG T
|
| |