Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2295 |
Symbol | |
ID | 4039116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2516156 |
End bp | 2516947 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637977693 |
Product | hypothetical protein |
Protein accession | YP_584443 |
Protein GI | 94311233 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000011125 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000111621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAACCA GCAACGAACC ATTGCAACTC AACCTCGGCT CCCTGCGCAG CGCGATGTCG CTGACGCTGC ACACCCACCA CGCCTCGCGC ATCTGGCATG GCCGCGCCGC CGCCGAGGGG CGACCCGGCA TCGTCGGCCT GAACGGCTAC ATCGCCGTGA TGAACAAGAT GAAGCGCGGC TCGGAGCAGG ACGACCCGTA CAGCGACTGG TGGATGTTGC GCATCGAGGA AAAGCTCGAC CAGACCAGGA CCACGTTGCA ATCGCTGCGC GAGCAGGTTG ACCAGGCACT GGCCGGCGTG CCTGCGGCGT TGAGCCTGGG TGAGAACCTC AACGTGCAGC CGGTGAAGCT CCCCTTGTTC GTGAACGCGC AGCTCGGCTT TGCCGCCGTC TATCTGCTGG CCGACTACGA CGACATCGCC CGCAAGCTGA TCCTCGCCCA CCACACCGCG CTGATCGATC GCTCGACGTT GGAGCGCTGG CTCAACGAAG GTGCCCACGC GCTGCGCAGC CTGTTCAGCC TGGCCCAGCA ATACCGCTAC TCGGGCTGCA CCCGCGACGA CTTCGCGGCC AAGAACGCCG CAGCTCGGGC AGCATTGGAG AAGTTCGGCG AACTGCCGCA GGACGTGCTC GAAGGCATGC GCCGCTCGAA GTTTGCGCCG CCCGTCGTGC GCCGTGGTCT GCAACAGCGT GGTGATAGCG CTGCCGCAGC CGCATCTCCC ACCGACGAAG GCGCTGCCGC CGATTCGGCC GAGGCCAAGT CCACAGCCGC CGGCGAGGAC GAACCGGCAT GA
|
Protein sequence | MATSNEPLQL NLGSLRSAMS LTLHTHHASR IWHGRAAAEG RPGIVGLNGY IAVMNKMKRG SEQDDPYSDW WMLRIEEKLD QTRTTLQSLR EQVDQALAGV PAALSLGENL NVQPVKLPLF VNAQLGFAAV YLLADYDDIA RKLILAHHTA LIDRSTLERW LNEGAHALRS LFSLAQQYRY SGCTRDDFAA KNAAARAALE KFGELPQDVL EGMRRSKFAP PVVRRGLQQR GDSAAAAASP TDEGAAADSA EAKSTAAGED EPA
|
| |