| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2285 |
|---|
| Symbol | |
|---|
| ID | 4039105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2506827 |
|---|
| End bp | 2508053 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637977682 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_584433 |
|---|
| Protein GI | 94311223 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0100423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000500098 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATCACG CCACCCCGCT CATCAGCACA ATCGTCGGCG GTATCGTGCT GGCGTTCATT
CTGGGTGCGA TTGCCAACAA GTTCAGGCTA CCACCGCTGA TCGGCTATCT TTGCGCGGGC
ATCGTCGTGG GGCCGCATAC GCCTGGCTAC ACGGCAGATC AGACGCTGGC GCCGGAGCTT
GCGGAGCTAG GCGTGATCCT GCTGATGTTC GGCGTCGGGC TGCATTTCTC GGTCAAGGAC
CTGATGGCCG TGAAGCGAAT CGCCATTCCG GGGGCGATCG TCCAGATCAG CATCGCCACG
GCTCTCAGCA TGTTGGTGGC CTGGGGGTTC GACTGGTCCT GGGGGCAAGG GCTCGTGTAC
GGGCTGGCAC TCTCGGTGGC CAGTACCGTG GTGCTGCTGC GCGCGCTGCA AGAGCGCGAT
TTGATCGAGT CGCCACAAGG CCGCATTGCC GTGGGCTGGC TGATCGTCGA AGATCTCGCG
ATGGTGCTGA CGCTGGTGTT GCTGCCGGCC ATGGCGCGAT TGCTTGGTGG CGGTGATGCC
AATGCGACAG CGCCGACCAC GATGGAGGTA CTGATCGAGG TCCTCTCCAC GCTTGGCAAG
GTGGCCGCGT TCGTCGCGGT GATGCTGGTG ATTGGCCGGC GCTTCATTCC GTGGATGCTT
GAGCGCATTG TCTGGACCGG TAGTCGCGAG TTGTTCCGCC TTGGGGTGCT GGCCACCGCG
CTGGGTGTGG CCTTCGGCGC CTATGCGTTG TTCGGCGTGT CGTTTGCCCT CGGCGCCTTC
TTCGCCGGCA TGGTGCTGGC CGAATCGGAA TTCAGCCATC GCGCGGCAGA GGAATCACTG
CCGCTGCGCG ATGCCTTCTC GGTGCTGTTC TTCGTCTCGG TGGGCATGCT GTTCGACCCA
ATGGTGCTCG TCAACGACCC CTGGGGGGTG CTGGCGACGC TCCTGATTAT CGTCGTCGGC
AAGTCGCTCG CCGCGCTCGG CATCGTGCGG GCCTTTGGCC TGAATAACCG GACCGGTCTG
ACGATTGCCG TGAGCCTCGC GCAGATCGGC GAGTTCTCCT TCATTCTGGC CAGCCTCGGT
GTCTATCTGG ACATCCTGCC AGAGCGGGGG CAGGCGCTGA TCCTTGCGGG TGCATTGCTG
TCGATCGTGC TCAATCCCGT GCTGTTTCAC CTGCTCGACC GCTACACCGC GCGCGAAGAC
AAGCAGGGTG ATCCGCAACC TGCCTGA
|
|---|
| Protein sequence | MHHATPLIST IVGGIVLAFI LGAIANKFRL PPLIGYLCAG IVVGPHTPGY TADQTLAPEL
AELGVILLMF GVGLHFSVKD LMAVKRIAIP GAIVQISIAT ALSMLVAWGF DWSWGQGLVY
GLALSVASTV VLLRALQERD LIESPQGRIA VGWLIVEDLA MVLTLVLLPA MARLLGGGDA
NATAPTTMEV LIEVLSTLGK VAAFVAVMLV IGRRFIPWML ERIVWTGSRE LFRLGVLATA
LGVAFGAYAL FGVSFALGAF FAGMVLAESE FSHRAAEESL PLRDAFSVLF FVSVGMLFDP
MVLVNDPWGV LATLLIIVVG KSLAALGIVR AFGLNNRTGL TIAVSLAQIG EFSFILASLG
VYLDILPERG QALILAGALL SIVLNPVLFH LLDRYTARED KQGDPQPA
|
|---|
| |