| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2270 |
|---|
| Symbol | |
|---|
| ID | 4039089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2491533 |
|---|
| End bp | 2493515 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637977666 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_584418 |
|---|
| Protein GI | 94311208 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0167504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.097797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA TCGAGTCGGT GATGCAGGAG CATCGCGTTT TCAATCCCCC TGCGTCGTTC
GCCAAGACCG CCGCGATCCC CAGCATGGAG GCCTACCAGG CCCTGTGCGA CGAGGCTGCA
AAGGATTACG AGGGCTTCTG GGCCCGCCAC GCACGCGAGC TGCTGCATTG GCACAAGCCG
TTCACGAAGG TGCTCGACGA GAGCAACGCG CCGTTCTACA AGTGGTTCGA GGATGGCGAG
ATCAATGCCT CGTACAACTG CCTCGACCGC AATGTCGAGA AGGGCCTCGG CGACAAGACG
GCCATCGTCT TCGAGGCCGA CGACGGCACG GTGACGCGCG TCAGCTACCA GGAATTGCTG
GCGAAGGTCA GCCGCTTCGC CAACGGCATG AAGGCCCTTG GCATCAAGAA GGGCGACCGC
GTCGTGATCT ACATGCCAAT GTCTGTCGAA GGCGTCGTGG CCATGCAGGC CTGCGCGCGC
ATCGGCGCCA CGCACTCGGT GGTGTTCGGC GGCTTCTCGG CGAAGTCCCT GCAGGAACGT
CTGGTGGACG TGGGCGCCGT GGCGCTGATC ACGGCCGATG AGCAGATGCG TGGTGGCAAG
GCGCTGCCGC TGAAGGCCAT CGCTGACGAG GCGCTGACGC TGGGCGGCTG CGAGGCCGTC
AAGAACGTGA TCGTCTATCG CCGCACGGGC GGCAACGTTG CCTGGACCGA AGGCCGTGAT
CGTTCGATGG AAGACGTCGC CGCCGGTCAG TCCGATAACT GCCCCGCCGA GCCCGTTGGC
GCCGAGCACC CGCTGTTCGT GCTCTACACG TCGGGCTCCA CCGGCAAGCC GAAGGGCGTG
CAGCACAGCA CGGGCGGTTA CCTGCTGTGG GCGCTGATGA CGATGCGCTG GACCTTCGAT
ATCAAGCCCG ATGACATGTT CTGGTGCACG GCCGATATCG GCTGGGTCAC CGGCCACACC
TATATCACCT ACGGCCCGCT GGCCGCAGGC GCCACGCAGA TCGTGTTCGA AGGCGTGCCG
ACGTTCCCGA ACGCCGGCCG GTTCTGGGAC ATGATCCAGC GCCACAAGGT CTCGATCTTC
TACACCGCGC CGACGGCGAT CCGCTCGCTG ATCAAGGCCG CCGAGGCCGA CGAGAAGATC
CATCCGAAGC AGTACGACCT CTCGAGCCTG CGCCTGCTGG GCACCGTGGG CGAGCCGATC
AATCCAGAGG CATGGATGTG GTACTACAAG AATATCGGCC GCGAGCGTTG CCCGATCGTC
GATACGTTCT GGCAGACCGA AACTGGCGGC CACATGATCA CGCCGCTGCC GGGCGCCACG
CCGCTGGTGC CGGGCTCGTG CACGCTGCCG CTGCCGGGCA TCATGGCGGC CATCGTCGAC
GAAACCGGGC AGGACGTGCC GAACGGCAAT GGTGGCATCC TGGTCGTCAA GCGTCCGTGG
CCGTCGATGA TCCGCACGAT CTGGGGCGAC CCGGAGCGCT TCAAGAAGAG CTACTACCCC
GAGGAACTCG GCGGCAAACT GTACCTGGCT GGCGACGGTT CGATCCGTGA CAAGGAAACC
GGGTACTTCA CGATCATGGG CCGTATCGAT GACGTGCTGA ACGTGTCGGG CCATCGCATG
GGCACGATGG AAATCGAGTC AGCGCTGGTC TCGAACCCGA TCGTGGCCGA GGCCGCCGTG
GTGGGTCGTC CCGATGACAC CACCGGCGAG GCGATCTGCG CGTTCGTGGT GCTCAAGCGT
TCGCGGCCGA CGGCTGAAGA AGCCGTGAAG ATCGCGGCCG AGCTGCGCAA CTGGGTGGGC
AAGGAAATCG GCCCGATCGC CAAGCCGAAG GACATCCGCT TCGGCGACAA TCTGCCCAAG
ACGCGTTCGG GCAAGATCAT GCGCCGCCTG CTGCGTTCGC TGGCCAAGGG CGAGGACATC
ACGCAGGACA CCTCGACGCT GGAGAACCCG GCCATTCTCG ATCAGCTCAA GCAAGCCCAG
TAA
|
|---|
| Protein sequence | MSAIESVMQE HRVFNPPASF AKTAAIPSME AYQALCDEAA KDYEGFWARH ARELLHWHKP
FTKVLDESNA PFYKWFEDGE INASYNCLDR NVEKGLGDKT AIVFEADDGT VTRVSYQELL
AKVSRFANGM KALGIKKGDR VVIYMPMSVE GVVAMQACAR IGATHSVVFG GFSAKSLQER
LVDVGAVALI TADEQMRGGK ALPLKAIADE ALTLGGCEAV KNVIVYRRTG GNVAWTEGRD
RSMEDVAAGQ SDNCPAEPVG AEHPLFVLYT SGSTGKPKGV QHSTGGYLLW ALMTMRWTFD
IKPDDMFWCT ADIGWVTGHT YITYGPLAAG ATQIVFEGVP TFPNAGRFWD MIQRHKVSIF
YTAPTAIRSL IKAAEADEKI HPKQYDLSSL RLLGTVGEPI NPEAWMWYYK NIGRERCPIV
DTFWQTETGG HMITPLPGAT PLVPGSCTLP LPGIMAAIVD ETGQDVPNGN GGILVVKRPW
PSMIRTIWGD PERFKKSYYP EELGGKLYLA GDGSIRDKET GYFTIMGRID DVLNVSGHRM
GTMEIESALV SNPIVAEAAV VGRPDDTTGE AICAFVVLKR SRPTAEEAVK IAAELRNWVG
KEIGPIAKPK DIRFGDNLPK TRSGKIMRRL LRSLAKGEDI TQDTSTLENP AILDQLKQAQ
|
|---|
| |