Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2235 |
Symbol | |
ID | 4039053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2450563 |
End bp | 2451342 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977630 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_584383 |
Protein GI | 94311173 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.859699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0514044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACA TGACGCTCAA TCCACGCCAG ACCGCACTCC TCGAGGAAGT CCGCACGCAG GGCTTTGCCT CTATCGACGA ACTCGCGCGC AAGTTCGGCG TGACCCTGCA AACGGTGCGC CGGGACGTCA ACCTGCTGGC CGAGAACGGC ATGCTGGCCC GATTTCATGG CGGGGTACGG GTAGAGGGAT CGACCACCGA GAACATTGCC TACCGGCAAC GCCAGGTGCT GAACGCGGAG GGTAAGGCGC GCATCGCGCG CGCGGTGGCG GCTGCCGTGC CGGAAGGCTG CTCGCTGATC CTGAACATCG GCACCACGGT GGAGGAAGTG GCGCGCGCGC TGATCCATCA CCGGGGCTTG CGGGTAATCA CGAACAACCT GAACGTGGCC AATATCCTGG CCGACAACCC CGACTGCGAG GTCATCGTCG CCGGTGGCGT GCTGCGTTCA CGCGACCGCG GCATCGTTGG CGAGGCTACG GTGGAATTTA TCCGGCAGTT CAAGGTGGAT ATCGGCCTGA TCGGCATCTC GGGCATCGAG GCCGACGGCA CGCTGCGCGA CTATGATTTT CGCGAGGTCA AGGTGTCTCG CACGATCATG GAACACTCGC GCGAAATCTG GCTGGCGGCC GACGCCAGCA AGTTCAACCG GCGAGCCATG GTGGAACTGG CGCCGCTCGC GAGCATCGAC CGGCTATTCA CGGACGAGCC GTTACCCGCG CCTTTCGACA CGATGCTGCA GGAAAGCGGG GTGGAATGTG TGGTCGCGGA TCAGGAGTGA
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Protein sequence | MPDMTLNPRQ TALLEEVRTQ GFASIDELAR KFGVTLQTVR RDVNLLAENG MLARFHGGVR VEGSTTENIA YRQRQVLNAE GKARIARAVA AAVPEGCSLI LNIGTTVEEV ARALIHHRGL RVITNNLNVA NILADNPDCE VIVAGGVLRS RDRGIVGEAT VEFIRQFKVD IGLIGISGIE ADGTLRDYDF REVKVSRTIM EHSREIWLAA DASKFNRRAM VELAPLASID RLFTDEPLPA PFDTMLQESG VECVVADQE
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