| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2212 |
|---|
| Symbol | |
|---|
| ID | 4039030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2425612 |
|---|
| End bp | 2426505 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637977607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584360 |
|---|
| Protein GI | 94311150 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00559639 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.433652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA CGACTCTCCC CGCCACCTCC CCGCCTGCCA GCCTGATGCT GGCCACCGAC
CTGAGCCCAC GCTGCGATCG CGCCCTGGAC CGTGCAGCGG GACTGGCCCA AGAATGGAAG
GCCGAACTGA TCGTGGCCCA TGTGCTCGAC CCCGCCGCGC ACCCGGACCA GGCACTGGCC
TGGGCTGCCG ATACCGGCGG TGACGGCGAT GCCCTGCACA TCGCCCGCCG ACAGATCGAT
CGTGACCTGG CCGGACTACC CGTACGTGCC GAGGTGCGAA TCATGAAGTC CCGGGATATC
TCGGAGACGA TCCGCAACAT GGCAACCGTT TCCGGCGTCG GTCTGGTGGT CGCCGGCGTT
GCGCGGTATG AGTTGCTTGG CCGGTTCCTG CTCGGCTCTA GTGTCGAGCG CCTGGCGCGC
ACGCTCGCGC AGCCGTTGCT GATAGTGCGT AATCGCCCGC ACGCGCCCTA CCGCCGGATC
GTTGTGGCCA CCGACTTCTC CGAAGCCTCG CGTAATGCGC TGCTGACGGC GGCGCAGCTT
TTCCCGGGAT GCGAACTAAC GGCTTTTCAT GCCTACCTGC CGCCTTTCGC GGGGCTGACC
GACACGCAAC CGCAGCCTGC CTCCGCGCAA GCGCAGGAGC GAGCGCAGTA CGACGCATTC
ATCGCTGCCA CCGCCTTGCC CGCTGGAACG CGCGTCACAC CGCTGATTGT GCGTGGTGGG
TTGGAATTGC ACCTGACCCA GCACGTCCGC CAGCACGATG TCGACCTGGT GGTGATGGGC
GCGCAGGGTC GCGATGCCCT GACTGGCGCG TTGCTGGGCA GCACTGCCGC AAAACTGCTC
GACTGCCTGC CCTGCGACTC AATGGTCGTG CCCCGGCCGC GCTCGGCGGG TTGA
|
|---|
| Protein sequence | MPMTTLPATS PPASLMLATD LSPRCDRALD RAAGLAQEWK AELIVAHVLD PAAHPDQALA
WAADTGGDGD ALHIARRQID RDLAGLPVRA EVRIMKSRDI SETIRNMATV SGVGLVVAGV
ARYELLGRFL LGSSVERLAR TLAQPLLIVR NRPHAPYRRI VVATDFSEAS RNALLTAAQL
FPGCELTAFH AYLPPFAGLT DTQPQPASAQ AQERAQYDAF IAATALPAGT RVTPLIVRGG
LELHLTQHVR QHDVDLVVMG AQGRDALTGA LLGSTAAKLL DCLPCDSMVV PRPRSAG
|
|---|
| |