| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2204 |
|---|
| Symbol | |
|---|
| ID | 4039021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2416240 |
|---|
| End bp | 2417289 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637977598 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_584352 |
|---|
| Protein GI | 94311142 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.3497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCCGT CATGCAAATT GATGGGCATC AAGAACGTAG TCGGCGAAGG GTGGCAAAAG
GGCAGTCTGA TCCACCACTG GAACTGCCCG ATGTCCTTCC CCAAAACCGT CTGTTGCCTG
CCGATTCTCT TGGCGTGCCT TGGCGCGTCA TGCGAGCGCG CGCAGGACGA TGACGAACCC
GATTACCCTC TGCCCAAGCT CGTGGCGCAT CGCGGTGGCA CGGCGGATCG CCCGGAAAAC
ACGCTTGTGG CGATCGAGTC GGCATTGCGC CAACGTGCCG ACATGATCTG GCTGTCGGTG
CAAACGAGCC TCGATGGCGT GCCGGTGCTG TACCGTCCTA GCGACCTGTC CTCGCTGACC
AATGGATCGG GCAAGGTGGC CGATTTCAGC GCCGCCACGC TGGCGACGCT CAATGCCGGA
TGGTCCTTCG CCGAAATGGG ATCGGATGGC GTGAAGCGCT ACCCCTATCG CGACAGTCCG
GTCGGCATTC CCACGCTGCA GCAGGCATTG CGTGCCATCC CGGCCAACGT GCCGATCATC
CTCGACATGA AGTCGATGCC CGCGTCGGCA CAGACGGCCG CGGTGGCTGC CGTGCTGGAT
GCCGAAAGCG CCTGGAGCCG CGTGCTGATC TACTCGACCG AGGCCGATTA CCAGAATACG
TTCGCAGCCT GGCCACGCGC GCGGCTGGCC GAGGCGCGTG ATGTGACCCG GCGTCGACTG
GTATCCGCAA CGCTTGGCCA GCGCTGCGAT GCGCCGTCCG TTTCAGGTGT GTGGGCGGGA
TTCGAGATGC GACGCAACGT GGACGTGGTT GAGACCTTCA CGCTCGGAGA GGGGCATTCG
CCGGTCCAGG CGGTGCTCTG GACCAAAGCC TCTGTCCATT GCTACCGGTC GAAAGTCTCG
GCCAACCTCG TGGCATTCGG CGTGAATGAT CAGGCTGACT ATTGCGAGGC AAAGCGTTTG
GGGCTGGATG CTGTCATGGT AGATTCTCCA GAAAAGATGG CCGGCATCCG AACGCAAGTG
GAAACGAACC CCGCGTCGTG CAACCAGTAG
|
|---|
| Protein sequence | MPPSCKLMGI KNVVGEGWQK GSLIHHWNCP MSFPKTVCCL PILLACLGAS CERAQDDDEP
DYPLPKLVAH RGGTADRPEN TLVAIESALR QRADMIWLSV QTSLDGVPVL YRPSDLSSLT
NGSGKVADFS AATLATLNAG WSFAEMGSDG VKRYPYRDSP VGIPTLQQAL RAIPANVPII
LDMKSMPASA QTAAVAAVLD AESAWSRVLI YSTEADYQNT FAAWPRARLA EARDVTRRRL
VSATLGQRCD APSVSGVWAG FEMRRNVDVV ETFTLGEGHS PVQAVLWTKA SVHCYRSKVS
ANLVAFGVND QADYCEAKRL GLDAVMVDSP EKMAGIRTQV ETNPASCNQ
|
|---|
| |