Gene Rmet_2203 details

Gene Information

• Locus tag: Rmet_2203
• Symbol: prpE
• ID: 4039020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007973
• Strand: -
• Start bp: 2414268
• End bp: 2416157
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637977597
• Product: propionyl-CoA synthetase
• Protein accession: YP_584351
• Protein GI: 94311141
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.249852
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGGCAA GCCGCGCACT GCACGCGCGC TCCCTTTCCG ACCCGGCAGG ATTCTGGGCC 
GAACAAGCCG CACGTATCGA TTGGGAGACC CCCTTCGAAC GCGTGCTCGA CGACAGTCGC 
CCACCTTTCG CCCGCTGGTT CGTCGGCGGG CGCACCAACA TCTGCCATAA CGCCATCGAC 
CGGCACTTGT CCGCGCGTGC CGACCAGCGG GCGCTGGTCT ATGTCTCGAC CGAGACCGAT 
ACCGAACGCA CCTACACTTA CCGCGAGTTG CATGACGAAG TCACGCGCAT GGCGGCGACG 
CTGCAGGGGC TGGGCGTGCA GCGCGGCGAC CGGGTGCTGA TCTACATGCC GATGATTCCG 
GAGGCGATGT TCGCGATGCT GGCCTGCACG CGCATCGGCG CCGTGCATTC GGTGGTGTTC 
GGTGGGTTTG CCTCGGTCAG CCTGGCGGCC CGTATCGACG ACGCCAAGCC ACGAGTGATC 
GTGAGCGCCG ATGCCGGTTC GCGCGCGGGC AAGGTGGTGC CGTACAAGCC GCTGCTTGAT 
GAGGCGATCC GGCTGGCTGG CCATCATCCC GAAAAGGTGC TGCTGGTGGA CCGCAAGCTG 
GCAGAGATGC CGCTGGTCAG CGGCCGCGAC CAGGACTACG CGGCCTGGCG CGACAAGGTG 
GCCGGACAAG CGGTGCCATG CGTCTGGATG GAATCGAGCG AGCCATCCTA CGTGCTCTAC 
ACGTCGGGCA CCACGGGCAA GCCAAAGGGC GTGCAGCGAG ACACCGGTGG CTACGCGGTG 
GCACTGGCCA CGTCGATGGA GAACATCTTC TGTGGCAAGC CGGGCGACAC GATGTTCACC 
GCGTCCGATA TCGGATGGGT GGTGGGCCAT AGCTACATCG TCTACGGGCC GCTGCTGGCC 
GGCATGACCA CGGTCATGTA CGAGGGCACG CCGATTCGTC CTGATGGCGC GATCCTGTGG 
AAGATCGTCG AGCAGTACGG CGTCAACATC ATGTTCAGCG CGCCTACGGC GATCCGTGTA 
CTCAAGAAGC AGGACCCGGC GCTGCTCAAG CGTCACGACC TGTCCAGCCT GCGGCTGTTG 
TTCCTGGCGG GCGAGCCACT GGACGAACCT ACCGCGCGCT GGATTCAGGG CGGCATCGGC 
AAGCCCGTGG TCGACAACTA CTGGCAGACC GAATCGGGCT GGCCGATTAT CGCTATCCAG 
CGCGGCGTGG AAGCGCTGCC ACCCAAACTG GGATCTCCCG GGGTGCCGGC CTACGGTTAC 
GACCTGCGCA TCGTCGATGA GGTCACCGGC GAGGAGTGTC CGCCAAACAC CAAGGGCGTG 
GTGGCGATCG ACTATCCGCT GCCACCGGGC TGCATGTCGA CGGTCTGGGG CGACGACGAC 
CGCTTCATTC GCACGTACTG GTCGGCGGTG CCGAATCGTC AGTGCTATTC CACATTCGAC 
TGGGGTATCC GCGACGAGGA TGGCTACGTC TTCATCCTCG GCCGCACCGA CGATGTGATC 
AACGTGGCAG GCCACCGACT GGGCACCCGA GAGATCGAGG AAAGCCTGTC GTCGCACCCG 
GGCGTGGCCG AGGTGGCCGT GGTCGGCGTG CAGGATGCGC TGAAGGGCCA GGTCGCCATG 
GGCTTCTGCA TTGCGCGTGA CGCCGGGCGC ACGGCAACTG AAGCGGACCG TATGGCATTC 
GAGGGGGAGT TGATGAAGAC GGTGGAGCAG CAGCTCGGCG CGGTGGCGCG GCCGGCGCGC 
GTGTTCTTCG TCAATGCGCT GCCCAAGACA CGCTCGGGCA AATTGCTGCG CCGCGCCATT 
CAGGCGGTGG CGGAAGGCCG TGATCCGGGT GACCTGACCA CGATCGAGGA CCCGACGGCG 
CTGGAGCAGG TGAAGGAGTC GCTGGCCTGA 

 

Protein sequence

MTASRALHAR SLSDPAGFWA EQAARIDWET PFERVLDDSR PPFARWFVGG RTNICHNAID 
RHLSARADQR ALVYVSTETD TERTYTYREL HDEVTRMAAT LQGLGVQRGD RVLIYMPMIP 
EAMFAMLACT RIGAVHSVVF GGFASVSLAA RIDDAKPRVI VSADAGSRAG KVVPYKPLLD 
EAIRLAGHHP EKVLLVDRKL AEMPLVSGRD QDYAAWRDKV AGQAVPCVWM ESSEPSYVLY 
TSGTTGKPKG VQRDTGGYAV ALATSMENIF CGKPGDTMFT ASDIGWVVGH SYIVYGPLLA 
GMTTVMYEGT PIRPDGAILW KIVEQYGVNI MFSAPTAIRV LKKQDPALLK RHDLSSLRLL 
FLAGEPLDEP TARWIQGGIG KPVVDNYWQT ESGWPIIAIQ RGVEALPPKL GSPGVPAYGY 
DLRIVDEVTG EECPPNTKGV VAIDYPLPPG CMSTVWGDDD RFIRTYWSAV PNRQCYSTFD 
WGIRDEDGYV FILGRTDDVI NVAGHRLGTR EIEESLSSHP GVAEVAVVGV QDALKGQVAM 
GFCIARDAGR TATEADRMAF EGELMKTVEQ QLGAVARPAR VFFVNALPKT RSGKLLRRAI 
QAVAEGRDPG DLTTIEDPTA LEQVKESLA