Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2188 |
Symbol | |
ID | 4039005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2396120 |
End bp | 2398069 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637977582 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_584336 |
Protein GI | 94311126 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.350229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.438236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATGCA GCTACCCGTT GGCAAGGCAA TTGGAAAGGA GTTCGGCCTT GAATAACAAC CTGTTTCAAA AGGCGGCAAT CTGGCTCGTA ATCGCGCTGG TATTGTTCAC CGTCTTCAAG CAGTTCGACA AACCGCGTGC CCAGGACAGT GTCACCTATT CGCAGTTCAT GGATGACGCC AAGAACGGCA AGGTGTCGCG TGTCGACGTG CAGGGCCGCA ACCTCGTGGT TTCGCCCAAG GAAGGCTCCA AGTACACGAT CATTTCGCCG GGCGATATCT GGATGGTCGG CGACCTGATG AAGTATGGCG TCCAGGTGAC CGGCAAGGCT GACGATGAGC CCAACGTGCT GGTCCAGGCG CTGTACTACC TCGGGCCGAC GCTCCTGATC ATCGTTTTCT GGTTCTACAT GATGCGGCAG ATGCAGGGCG GGGGGAAAGG CGGAGCCTTC TCCTTCGGTA AATCCCGCGC GCGCCTGATC GACGAGAACC AGAACGCCGT TACCTTCGCT GACGTCGCGG GTTGCGACGA GTCGAAGGAA GAAGTGGTCG AACTGGTCGA CTTCCTGAAG GACCCGCAGA AATTCCAGAA GCTGGGCGGA CGTATTCCGC GCGGCGTGCT GCTGGTCGGG CCTCCGGGTA CCGGCAAGAC GCTGCTGGCG CGTGCCATCG CCGGTGAGGC CAAGGTGCCG TTCTTCAGCA TCTCGGGTTC GGACTTTGTG GAAATGTTCG TCGGCGTGGG TGCGGCTCGT GTGCGCGACA TGTTCGAGAA CGCCAAGAAG CAGGCCCCCT GCATCGTGTT CATCGACGAA ATCGACGCGG TCGGCCGCCA TCGTGGCGCC GGCATGGGCG GCGGTAACGA CGAGCGCGAG CAGACCCTGA ACCAGATGCT GGTCGAGATG GATGGCTTCG AGGCCAACTC TGGCGTGATC GTGATCGCCG CGACCAACCG TGCCGACGTG CTGGACAAGG CACTGCTGCG TCCGGGCCGT TTCGACCGTC AGGTCTATGT GGGCCTGCCG GACATCCGCG GCCGCGAGCA GATCCTGAAG GTCCATATGC GCAAGGTGCC GATCGGCAAC GACGTGGATG CATCGATCAT CGCTCGTGGT ACGCCTGGCT TCTCGGGTGC GGACTTGGCC AACCTGGTCA ACGAGGCTGC GCTGTTCGCC GCCCGCCGCA GCAAGCGCGT GGTGGACATG CAGGACTTCG AGGACGCCAA GGACAAGATT TATATGGGTC CGGAGCGCAA GTCGACGGTC ATGCGCGAGG AAGAGCGCAA GGCCACGGCT TACCACGAGT CTGGCCATGC CGTGGTTGCC AAGCTGCTGC CGAAGGCCGA TCCGGTCCAC AAGGTCACGA TCATGCCGCG TGGTTGGGCG CTGGGCGTAA CCTGGCAGTT GCCGGAGCAT GACAAGTACT CAAAGTACAA GGACAACATG CTTGAGGAAA TTGCCATCCT GTTCGGCGGC CGCGCTGCCG AAGAGGTGTT CCTCAATGCC ATGAGCACCG GTGCTTCGAA CGACTTCGAG CGTGCCACCA AGATCGCCCG CGATATGGTG ACCCGCTTTG GCATGAGCGA TTCGCTCGGC GCGATGGTCT ACGTGGACAC AGAGCAGGAC GGCATGTTCG GCAAGCTGTC GTCGAAGACC GTGTCCGAAG CGACGCAGCA GAAGGTTGAC GCAGAGATCC GCCGCATCAT TGACGATCAA TACGCGCTGG CCAAGCGCTT GCTCGAAGAG AACCGCGACA AGGTCGAAGC GATGACCAAC GCGCTGATGG AGTGGGAAAC GATCGACGCC GAACAGGTGA ACGACATCAT GGCGGGCCGT CCGCCGCGTC CGCCGCGTGG CGCGCAGGGT CCGAACAGCG GTGGCAATAC GCCTCCTGGC GGCTCCCCGG TGGCACCGAC CAATGCACCC GCAACGGCAC GTGCCGACGA AACGGTTTGA
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Protein sequence | MQCSYPLARQ LERSSALNNN LFQKAAIWLV IALVLFTVFK QFDKPRAQDS VTYSQFMDDA KNGKVSRVDV QGRNLVVSPK EGSKYTIISP GDIWMVGDLM KYGVQVTGKA DDEPNVLVQA LYYLGPTLLI IVFWFYMMRQ MQGGGKGGAF SFGKSRARLI DENQNAVTFA DVAGCDESKE EVVELVDFLK DPQKFQKLGG RIPRGVLLVG PPGTGKTLLA RAIAGEAKVP FFSISGSDFV EMFVGVGAAR VRDMFENAKK QAPCIVFIDE IDAVGRHRGA GMGGGNDERE QTLNQMLVEM DGFEANSGVI VIAATNRADV LDKALLRPGR FDRQVYVGLP DIRGREQILK VHMRKVPIGN DVDASIIARG TPGFSGADLA NLVNEAALFA ARRSKRVVDM QDFEDAKDKI YMGPERKSTV MREEERKATA YHESGHAVVA KLLPKADPVH KVTIMPRGWA LGVTWQLPEH DKYSKYKDNM LEEIAILFGG RAAEEVFLNA MSTGASNDFE RATKIARDMV TRFGMSDSLG AMVYVDTEQD GMFGKLSSKT VSEATQQKVD AEIRRIIDDQ YALAKRLLEE NRDKVEAMTN ALMEWETIDA EQVNDIMAGR PPRPPRGAQG PNSGGNTPPG GSPVAPTNAP ATARADETV
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