| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2164 |
|---|
| Symbol | |
|---|
| ID | 4038979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2365944 |
|---|
| End bp | 2367812 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637977556 |
|---|
| Product | KAP P-loop |
|---|
| Protein accession | YP_584312 |
|---|
| Protein GI | 94311102 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4928] Predicted P-loop ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCATG ACAATGAGAC TACGGTGGAC TATGTCAACT TTAAACTGGT GGCGAAGGTC
TGCGCGGACC TAATCAGAAA CTCCGGTGGG GACCCAATCT CGATTGGTGT CTCAGGTGGC
TGGGGTACTG GTAAGTCCTC ACTCGTCCGC ATGATTGAAG CCGAACTGAT TTCTGCCAGG
AAATCAACTG CGTCATCCCG GGACAATAGT GAACCTTACG TAGTCGTGAC CTTCAACCCT
TGGCTGTACC AAGGATTTGA GGACGCCCGC ACCGCTTTGC TGCAAACAGT CGGTGACGCC
GTTCTCAAAC AGGCAGAGGG CTCGCAGACG CTCACCGATA AGGCGAAAGC GTTTGTGAAG
CGAATTAACC TGCTGAGGCT GGCCCAGCTT GGTGGCGAAG TGGCGGCGAC GCTGGTCACG
GGTGTTCCCG TCGGCTTGCT CAGCAAGGCA TTTGACCTTG GTATCGGCGC TTTTCAGAAG
GGCTCAGCGT CGGAGGTCGT GGACGCAATG AAGGGAGTAC CAGAGGCGAC GAAGGGCTTG
ATTGACGACG CAAAGCCACG GTCGCTACCC AAGGAAATCC AAGGCTTTCG GGATGACCTT
GAAGAACTAC TGAGTGAATT GGGTGTAACC CTTGTTGTGT TTGTGGACGA TTTGGACCGT
TGTTTGCCAA AAACCGCAAT CGCGACTCTG GAAGCCATCC GTTTGCTGCT GTTCCTCAAG
GGCAGCGCAT TCGTAGTAGC CGCAGACGAT GTCTTTATTC GAGGGGCGGT GCGAGTGCAT
TTCACCGGCA CAGGCCTGGC CGACGATGTC GTCACCAACT ATTTCGATAA GCTCATACAG
GTCCCGCTAC GGGTACCGCG CCTGGGTCCG AATGAAACTA AAGCATACGC CGCCCTGCTA
TTCCTTGAGC GTGCCCATCG AGAGAAGAGT ATTGACGACA CTCATTTCGA ACTGGCCAAG
AAGCGCGTGG AGGAGCGCCT TCGCGAAACT TGGAAGGGTA AGCGGGTAGA CCTCAGCTTC
TTGGAAAGCC TCGCGCCTCA GGCAGACGCC GAGTTGCAGT CGCTTATGGG ACTAGCCGAA
CGCCTTTCAC CTCTGCTGCT CAACGCGCGC GCGGTCCAGT CGAATCCCCG CCTGGTCAAG
CGATTTCTGA ACACGGTTTT TCTCCGTCAG GCGATGGCTA AGCCGCAGGG CATCGAAGTT
GACCTTCCGG TGTTGGCAAA ATGGCATCTA CTCGAGCGTT GCGAAGAGGG GCTCGCAAAT
GCGCTAGCTG AACTCGTTTC CGCCGATAGC GATGGGAAGG TTGCAGCAAT TCGCCAGGGG
GAAGAAGCGG CAAAGGATGC CGACCGGGCG CTTCCCGAGG TGTTCGGCGA AAAGCCCTTC
GCTCGCGAGT GGCTGCACCT GCAACCATCG TTGGCAGACA TCGACTTGCG GCCGGTGTTG
CATTTGAGCC GAGACGGCAC CGTGCGCGAC TTTGGCCATG ATGCGCTCAC CAGTGAAGGG
AAGGTACTGC AGGAGGCGCT GGTGGCCACT CGCACCAAGA GCAAGCAACT CGCCGACGAT
ATTCGTGCAG CAGGGGAAAC ACAGGCCATT CTCGCCATGA CCCGCGCATG GGAAGCCCGC
CGTGCCTCGC GTGACTGGAG CAAGTCTGAG GAAGTGCTGA TGCTGACGGA AGTCTGTGAA
GTCTTCCCTG CAGCAGGTCC GCGCGCCGCA GCGCAACTTG TGGAAGCGCC CGTCACTCAG
ATTAGCCCTG GTCTAGTCCA ACGGCTTGTG TCCGCTCCCT GGGCCCGCGA ATTGGTGAAT
CGTTGGGAAG CTGATAGCCA GACGAGCGAA GCGGTCAAAC GCGCAATACG CGCGGCAAGG
AAGACGTAA
|
|---|
| Protein sequence | MWHDNETTVD YVNFKLVAKV CADLIRNSGG DPISIGVSGG WGTGKSSLVR MIEAELISAR
KSTASSRDNS EPYVVVTFNP WLYQGFEDAR TALLQTVGDA VLKQAEGSQT LTDKAKAFVK
RINLLRLAQL GGEVAATLVT GVPVGLLSKA FDLGIGAFQK GSASEVVDAM KGVPEATKGL
IDDAKPRSLP KEIQGFRDDL EELLSELGVT LVVFVDDLDR CLPKTAIATL EAIRLLLFLK
GSAFVVAADD VFIRGAVRVH FTGTGLADDV VTNYFDKLIQ VPLRVPRLGP NETKAYAALL
FLERAHREKS IDDTHFELAK KRVEERLRET WKGKRVDLSF LESLAPQADA ELQSLMGLAE
RLSPLLLNAR AVQSNPRLVK RFLNTVFLRQ AMAKPQGIEV DLPVLAKWHL LERCEEGLAN
ALAELVSADS DGKVAAIRQG EEAAKDADRA LPEVFGEKPF AREWLHLQPS LADIDLRPVL
HLSRDGTVRD FGHDALTSEG KVLQEALVAT RTKSKQLADD IRAAGETQAI LAMTRAWEAR
RASRDWSKSE EVLMLTEVCE VFPAAGPRAA AQLVEAPVTQ ISPGLVQRLV SAPWARELVN
RWEADSQTSE AVKRAIRAAR KT
|
|---|
| |