Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2149 |
Symbol | |
ID | 4038964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2342034 |
End bp | 2344007 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637977541 |
Product | beta-lactamase-like protein |
Protein accession | YP_584297 |
Protein GI | 94311087 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.145303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTG CCCGCTTGAC CGCCCTTGCT TCCGCCGCGC TGACGATGTC CGTCGCACTC GCCGGCCCGA ATCCCGCTAC TCCGCTGACC GAGCAATCGA ACGCCGCATG GCTGCGCAAG CTGCCGTTCG CCGACCGTGC CGACTTCGAA GATGCCAAGC GCGGGCTCGT GGCGCGCTTC CCCGAGCCGA CGATCAAGAG CGCCGACGGC AAGACAGCGT GGGACTTCGG CGCGTATGCC TTCGAATCGG CGGCGGACGC CCCGCCCACC GTTAACCCGA GCCTCTGGCG ACTGGCGCAA CTGAATAACG AAGCTGGCCT GTTCAAGGTG GCTGACCGCG TCTATCAGGT GCGCGGCGCC GACCTGGCAA ACATGAACAT CGTCGAAGGC GACACCGGCC TGATCATCAT CGATACCTTG CTCACGGCGG AAACCGCCCG GGCCGCGCTC GACCTTTATT ACGCGCACCG TCCGCGCAAA CCCGTGCTGG CCGTGATCTA TACGCACAGC CACGCCGATC ATTTCGGCGG GGTACGTGGC ATCGTCAGCG AGGACGACGT GAAATCCGGC AAGGTCGAGA TCCTGGCGCC GAATGGCTTC ATGGACGAAG CCGTCAGCGA AAATGTGCTG GCAGGCGGCG CGATGGGCCG ACGGGCGCAG TACATGTACG GCACCAACCT GCCGAAGAAC GCCACGGGCC AGGTCGATAC CGGCCTGGGC AAAGCCACTG CGCGCGGCAC CATCACGCTG CTGGCGCCCA CGTCGTCGAT CACCAAGCCG ATCGAGACGC GCCGGATCGA CGGCATCGAC TTCGAATTCC AGCTCACCCC GGGCACCGAG GCGCCGGCGG AGATGAACAT CTATCTGCCG CAGTTCCGCA CGCTTTGCAT CGCCGAAAAC GCGGTGCGCA CCCAGCACAA CCTGCTGACG CTGCGCGGCG CGCAGGTGCG CGACGCCAAG GCATGGTCTT ACTTCCTGAG CCAATCGCTA TTGCGCTACG GCGATCGGAC CGATGTGCTG ATCGGCCAGC ATCACTGGCC CACCTGGGGC CACGCACGCA TCGTCGAGAT GCTGTCCGAC CAGCGCGACA TGTACGCCTA CCTGAACGAC CAGACCCTGC GGCTGCTGAA CCAGGGCCTG ACCCCGCTCG AGATCGCCGA CACGCTCAAA ACGCTGCCCG AGCCACTGGC CAGCAAGTGG TATGCACGGG ACTACTACGG ATCGGTCAGC CATAACGTAC GCGCGGTCTA CCAGCGCTAC CTGGGCTTCT ACGATGGCAA CCCGGCGCAC CTGAACCCGC TGCCGCCCGA GCAAACGGCC AGGAAGACCA TCGAATGGAT GGGCGGCGCC GATGCCGTGC TGGCCAAGGC CCGCGAGGCC TATGCACATG GCGACTACCG CTGGGTGGCG CAGATCGGCA ATGACCTGGT CTTCGCCGAT CCATCGAACG CCGCGGCGCG CGCGCTGCAG GCCGATGCGC TGGAACAGCT TGGCTACCAG AGCGAGAACG CCACGTGGCG CAACATCTAC CTGACCGGCG CTCAGGAACT TCGCGATGGC GTGCCCAAGC TGCAGGGCAG CTCGCTCGGC TCGGCCGATC TCGTGCGCGC GCTGACGGTG CCGAACTTCT TCGACTATCT GGCCGTGCGC CTGAACGCGG ACAAGGCCGC CGGCAAGGCC ATGACGCTGA ACTGGCAGTT CACGGACCTG AACCAGCGCT ACGCGATGAC GCTGCGCAAC AGCGCGCTGA CCTACGTGGC CGATGCCCAG CACGCGCAGC CGACCGCCAC GGTCACGCTG ACCAAGGCCA CGCTCGACAA GATCAGCCTG AAGCAGCTCA CCCTGCCGCA GGCCATGCAG TCGGGCGCGA TCCGCATCGA TGGCAACCCG CAGGCCGTGG CGGGCCTGTT CGCCATGCTC GACACGTTCG ACCCGGCCTT CAATATCGTC ACGCCGCACG GATACCAGAA GTAA
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Protein sequence | MRIARLTALA SAALTMSVAL AGPNPATPLT EQSNAAWLRK LPFADRADFE DAKRGLVARF PEPTIKSADG KTAWDFGAYA FESAADAPPT VNPSLWRLAQ LNNEAGLFKV ADRVYQVRGA DLANMNIVEG DTGLIIIDTL LTAETARAAL DLYYAHRPRK PVLAVIYTHS HADHFGGVRG IVSEDDVKSG KVEILAPNGF MDEAVSENVL AGGAMGRRAQ YMYGTNLPKN ATGQVDTGLG KATARGTITL LAPTSSITKP IETRRIDGID FEFQLTPGTE APAEMNIYLP QFRTLCIAEN AVRTQHNLLT LRGAQVRDAK AWSYFLSQSL LRYGDRTDVL IGQHHWPTWG HARIVEMLSD QRDMYAYLND QTLRLLNQGL TPLEIADTLK TLPEPLASKW YARDYYGSVS HNVRAVYQRY LGFYDGNPAH LNPLPPEQTA RKTIEWMGGA DAVLAKAREA YAHGDYRWVA QIGNDLVFAD PSNAAARALQ ADALEQLGYQ SENATWRNIY LTGAQELRDG VPKLQGSSLG SADLVRALTV PNFFDYLAVR LNADKAAGKA MTLNWQFTDL NQRYAMTLRN SALTYVADAQ HAQPTATVTL TKATLDKISL KQLTLPQAMQ SGAIRIDGNP QAVAGLFAML DTFDPAFNIV TPHGYQK
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