Gene Rmet_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2149 
Symbol 
ID4038964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2342034 
End bp2344007 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content66% 
IMG OID637977541 
Productbeta-lactamase-like protein 
Protein accessionYP_584297 
Protein GI94311087 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2015] Alkyl sulfatase and related hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.145303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG CCCGCTTGAC CGCCCTTGCT TCCGCCGCGC TGACGATGTC CGTCGCACTC 
GCCGGCCCGA ATCCCGCTAC TCCGCTGACC GAGCAATCGA ACGCCGCATG GCTGCGCAAG
CTGCCGTTCG CCGACCGTGC CGACTTCGAA GATGCCAAGC GCGGGCTCGT GGCGCGCTTC
CCCGAGCCGA CGATCAAGAG CGCCGACGGC AAGACAGCGT GGGACTTCGG CGCGTATGCC
TTCGAATCGG CGGCGGACGC CCCGCCCACC GTTAACCCGA GCCTCTGGCG ACTGGCGCAA
CTGAATAACG AAGCTGGCCT GTTCAAGGTG GCTGACCGCG TCTATCAGGT GCGCGGCGCC
GACCTGGCAA ACATGAACAT CGTCGAAGGC GACACCGGCC TGATCATCAT CGATACCTTG
CTCACGGCGG AAACCGCCCG GGCCGCGCTC GACCTTTATT ACGCGCACCG TCCGCGCAAA
CCCGTGCTGG CCGTGATCTA TACGCACAGC CACGCCGATC ATTTCGGCGG GGTACGTGGC
ATCGTCAGCG AGGACGACGT GAAATCCGGC AAGGTCGAGA TCCTGGCGCC GAATGGCTTC
ATGGACGAAG CCGTCAGCGA AAATGTGCTG GCAGGCGGCG CGATGGGCCG ACGGGCGCAG
TACATGTACG GCACCAACCT GCCGAAGAAC GCCACGGGCC AGGTCGATAC CGGCCTGGGC
AAAGCCACTG CGCGCGGCAC CATCACGCTG CTGGCGCCCA CGTCGTCGAT CACCAAGCCG
ATCGAGACGC GCCGGATCGA CGGCATCGAC TTCGAATTCC AGCTCACCCC GGGCACCGAG
GCGCCGGCGG AGATGAACAT CTATCTGCCG CAGTTCCGCA CGCTTTGCAT CGCCGAAAAC
GCGGTGCGCA CCCAGCACAA CCTGCTGACG CTGCGCGGCG CGCAGGTGCG CGACGCCAAG
GCATGGTCTT ACTTCCTGAG CCAATCGCTA TTGCGCTACG GCGATCGGAC CGATGTGCTG
ATCGGCCAGC ATCACTGGCC CACCTGGGGC CACGCACGCA TCGTCGAGAT GCTGTCCGAC
CAGCGCGACA TGTACGCCTA CCTGAACGAC CAGACCCTGC GGCTGCTGAA CCAGGGCCTG
ACCCCGCTCG AGATCGCCGA CACGCTCAAA ACGCTGCCCG AGCCACTGGC CAGCAAGTGG
TATGCACGGG ACTACTACGG ATCGGTCAGC CATAACGTAC GCGCGGTCTA CCAGCGCTAC
CTGGGCTTCT ACGATGGCAA CCCGGCGCAC CTGAACCCGC TGCCGCCCGA GCAAACGGCC
AGGAAGACCA TCGAATGGAT GGGCGGCGCC GATGCCGTGC TGGCCAAGGC CCGCGAGGCC
TATGCACATG GCGACTACCG CTGGGTGGCG CAGATCGGCA ATGACCTGGT CTTCGCCGAT
CCATCGAACG CCGCGGCGCG CGCGCTGCAG GCCGATGCGC TGGAACAGCT TGGCTACCAG
AGCGAGAACG CCACGTGGCG CAACATCTAC CTGACCGGCG CTCAGGAACT TCGCGATGGC
GTGCCCAAGC TGCAGGGCAG CTCGCTCGGC TCGGCCGATC TCGTGCGCGC GCTGACGGTG
CCGAACTTCT TCGACTATCT GGCCGTGCGC CTGAACGCGG ACAAGGCCGC CGGCAAGGCC
ATGACGCTGA ACTGGCAGTT CACGGACCTG AACCAGCGCT ACGCGATGAC GCTGCGCAAC
AGCGCGCTGA CCTACGTGGC CGATGCCCAG CACGCGCAGC CGACCGCCAC GGTCACGCTG
ACCAAGGCCA CGCTCGACAA GATCAGCCTG AAGCAGCTCA CCCTGCCGCA GGCCATGCAG
TCGGGCGCGA TCCGCATCGA TGGCAACCCG CAGGCCGTGG CGGGCCTGTT CGCCATGCTC
GACACGTTCG ACCCGGCCTT CAATATCGTC ACGCCGCACG GATACCAGAA GTAA
 
Protein sequence
MRIARLTALA SAALTMSVAL AGPNPATPLT EQSNAAWLRK LPFADRADFE DAKRGLVARF 
PEPTIKSADG KTAWDFGAYA FESAADAPPT VNPSLWRLAQ LNNEAGLFKV ADRVYQVRGA
DLANMNIVEG DTGLIIIDTL LTAETARAAL DLYYAHRPRK PVLAVIYTHS HADHFGGVRG
IVSEDDVKSG KVEILAPNGF MDEAVSENVL AGGAMGRRAQ YMYGTNLPKN ATGQVDTGLG
KATARGTITL LAPTSSITKP IETRRIDGID FEFQLTPGTE APAEMNIYLP QFRTLCIAEN
AVRTQHNLLT LRGAQVRDAK AWSYFLSQSL LRYGDRTDVL IGQHHWPTWG HARIVEMLSD
QRDMYAYLND QTLRLLNQGL TPLEIADTLK TLPEPLASKW YARDYYGSVS HNVRAVYQRY
LGFYDGNPAH LNPLPPEQTA RKTIEWMGGA DAVLAKAREA YAHGDYRWVA QIGNDLVFAD
PSNAAARALQ ADALEQLGYQ SENATWRNIY LTGAQELRDG VPKLQGSSLG SADLVRALTV
PNFFDYLAVR LNADKAAGKA MTLNWQFTDL NQRYAMTLRN SALTYVADAQ HAQPTATVTL
TKATLDKISL KQLTLPQAMQ SGAIRIDGNP QAVAGLFAML DTFDPAFNIV TPHGYQK