| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2115 |
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| Symbol | |
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| ID | 4038923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2296755 |
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| End bp | 2297915 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977501 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_584263 |
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| Protein GI | 94311053 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.213085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.555888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACGCC AGAAAACTGT CTCATCCGGA GTTGTCAGCA GGACCCGTCG TCCCAAGCAG
CCGGAAGGAA AGGCTGGAGT GGCAAGACCT GACGGCGGGA TCGACACGGA AATGTTCGGC
GACGATCCGG CCGCCGAACT GGTACCCGTC GCCGACGAAC CGATCGCGCC AGTTTCGCGC
GTCGGCCTGC GCAACACGGA CTTGAATGCG GACGACGCCG ATCACGATGA CGGCGACGAG
GAAGAATCCG AAGAGGATGA GGAAGAGGGC AGCAGTGAGA CCACTGCCGA GCCCGATGAC
TTCCGTACCG TGTTGCACAC GGAACTCGCC GCCGACACGG TCCAGCATTA TCTCAATCGC
ATCAGCATCA AGCCGCTGCT CTCCGCGCCG GAGGAACTCC ATTTCTCCAC GCTGGCCAAG
GGCGGTGACT TTTCCGCGCG TCAGGTGATG ATCGAGCGCA ATCTGCGTCT CGTGGTCAGC
ATCGCCAAGG GCTATCTGAA TCGGGGCGTG CCGCTGCTTG ACTTGATCGA GGAAGGCAAC
CTGGGCCTGA TGCACGCGAT CGAGAAATTC GATCCTTCGC GCGGATTCCG CTTTTCGACG
TATGCGACCT GGTGGATTCG CCAGAGCATC GAGCGCGCGA TCATGAACCA GGCACGCACC
GTGCGCTTGC CTGTGCACGT GATTCGCGAA CTCAACCAGG TACTGCGCGC CAAGCGCCAT
CTTGAAAAAG GTGGCACCGA TGGCCGCGAC GCCAGCCTCG AGGACATCGC TCACCTGCTC
GGCAAGACGC CGGACGAGGT GCAGGACGTG CTGGCACTCA ATGAACATAC CACCTCGCTC
GACACGCCGT TCGACCTCGA CCCGGGCTCC AGCCTGCTCG ATTTCCTTTC CGACGAGCAT
AACGCCGCAC CCGATCAGGA AGTGGCCCAC CGCGAGCTGG AAAACCTGAT GAAACTCTGG
CTGGCGCGCC TGTCGGAGAA GCATCGCTAT GTGGTGGAGC GCCGTTTCGG CCTCAATCAC
ATCGAGCCGG CCACGCTCGA GGAGCTGGCC GAGGAAATGG GTCTCACGCG CGAGCGCGTG
CGTCAGATCC AGCAGGAAGC GCTGGTCAAG CTCAAACGGC ATTTCGCTTC GCAAGGTGTA
CGCAAGGACG CCGTTCTATG A
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| Protein sequence | MPRQKTVSSG VVSRTRRPKQ PEGKAGVARP DGGIDTEMFG DDPAAELVPV ADEPIAPVSR
VGLRNTDLNA DDADHDDGDE EESEEDEEEG SSETTAEPDD FRTVLHTELA ADTVQHYLNR
ISIKPLLSAP EELHFSTLAK GGDFSARQVM IERNLRLVVS IAKGYLNRGV PLLDLIEEGN
LGLMHAIEKF DPSRGFRFST YATWWIRQSI ERAIMNQART VRLPVHVIRE LNQVLRAKRH
LEKGGTDGRD ASLEDIAHLL GKTPDEVQDV LALNEHTTSL DTPFDLDPGS SLLDFLSDEH
NAAPDQEVAH RELENLMKLW LARLSEKHRY VVERRFGLNH IEPATLEELA EEMGLTRERV
RQIQQEALVK LKRHFASQGV RKDAVL
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