| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2110 |
|---|
| Symbol | ndk |
|---|
| ID | 4038918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2292036 |
|---|
| End bp | 2292461 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637977496 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_584258 |
|---|
| Protein GI | 94311048 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.195535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AACGCACCCT GTCGATTATC AAGCCGGATG CCGTGGCCAA GAACGTTATC
GGCCAGATCT ACGCCCGTTT CGAGGCCGCT GGCCTGAAAG TCGTTGCAGC CAAGATGGTT
CACCTGTCGC GCGGTGAAGC CGAGCAGTTC TACGCTGTTC ACAAGGCGCG CCCGTTCTTC
AAGGACCTGG TGGACTTCAT GGTTTCGGGC CCGGTCATGA TCCAGGCTCT GGAAGGCGAA
AGCGCTATCG CCAAGAACCG CGACCTGATG GGTGCCACCG ACCCGAAGAA GGCTGAAAAG
GGCACGATCC GCGCCGATTT TGCCGACAGC ATCGACGCTA ACGCCGTGCA CGGTTCGGAC
GCTCCGGAAA CGGCTGCCGT GGAAGTGGCT TTCTTCTTCC CGGGCATGAA CGTTTACAGC
CGCTGA
|
|---|
| Protein sequence | MAIERTLSII KPDAVAKNVI GQIYARFEAA GLKVVAAKMV HLSRGEAEQF YAVHKARPFF
KDLVDFMVSG PVMIQALEGE SAIAKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD
APETAAVEVA FFFPGMNVYS R
|
|---|
| |