| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2106 |
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| Symbol | ispG |
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| ID | 4038914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2287670 |
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| End bp | 2288962 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977492 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_584254 |
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| Protein GI | 94311044 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.135968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA ACGCTTTCCA GCCCGTGATC CCGGGCCCGC TGCCGCGTCG CGTTTCGCGC
CAGGCCAGTG TTGTGTGGGG CGACAACATC GTGACGATCG GCGGCGGCGC GCCAGTGCGC
GTGCAGTCGA TGACCAACAC CGATACGGTG GATGCCATCG GCACCGCAAT CCAGATCAAG
GAACTGGCAC GCGCCGGTTC GGAGATTGTC CGTATCACGG TGAATACGCC GGAAGCCGCC
GCGGCCGTGC CGGCGATTCG CGAACAACTC GACCGTATGG GCGTGGATGT GCCGCTGGTG
GGCGACTTCC ACTACAACGG CCATACGCTG CTGCATGACT ACCCCGAGTG CGCGCAGGCG
CTCTCGAAGT ACCGGATCAA CCCCGGCAAT GTCGGCAAGG GTGCCAAGCG CGACAAGCAG
TTCGCCGAGA TGATCGAGAT GGCGTGCCGC TACAACAAAC CGGTGCGTAT CGGCGTGAAC
TGGGGCAGCC TGGATCAGGA TTTGCTGGCA CGCATCATGG ACGAAAACGC CCAGCGCGCC
GAGCCGTGGC CCGCGCAAAG CGTGATGGTA GAGGCGCTGA TTACGTCGGC GATCGAGTCG
GCCCAGAAGG CTGAAGAGAT CGGTTTGCCG GCCAATCAGA TCATTCTGTC GTGCAAGGTA
TCGCAGGTGC AGGAACTGGT CGCGGTATAC CGCGAGCTGG CGCGCCGCTG CGACTATGCG
CTGCATCTGG GTCTGACTGA AGCCGGCATG GGCAGCAAGG GTATCGTTGC GTCGACGGCT
GCGCTATCGG TGCTGCTGCA GGAAGGTATC GGCGACACGA TCCGGATCTC GCTGACGCCG
GAACCCGGCG CGCCGCGCGA GAAGGAAGTC TACGTCGGCC AGGAAATCCT GCAGACGATG
GGGCTGCGCA ACTTCACGCC GATGGTGATC GCGTGCCCGG GATGCGGTCG CACCACCAGC
ACAACGTTCC AGGAGCTGGC AGCAAGCATC CAGTCGTATC TGCGCGAGCA GATGCCGGTC
TGGAAGACGG CCTACCCGGG CGTGGAAGAA ATGGATGTGG CAGTGATGGG CTGCATCGTC
AACGGCCCTG GCGAAAGCAA GCACGCCAAC ATCGGTATTT CGCTGCCGGG TTCGGGCGAA
TCGCCTGCGG CGCCGGTGTT CGTGGACGGC GTCAAGGTGA AGACCCTGCG CGGCGAGAAC
ATCGCGCAGG AGTTCCAGGC GATCGTCGAC GAGTATGTAC GTTCGCACTA CGGTCCGGAC
GCGAAACAGG CTTCACAAGA AGCGGTGGCC TGA
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| Protein sequence | MNQNAFQPVI PGPLPRRVSR QASVVWGDNI VTIGGGAPVR VQSMTNTDTV DAIGTAIQIK
ELARAGSEIV RITVNTPEAA AAVPAIREQL DRMGVDVPLV GDFHYNGHTL LHDYPECAQA
LSKYRINPGN VGKGAKRDKQ FAEMIEMACR YNKPVRIGVN WGSLDQDLLA RIMDENAQRA
EPWPAQSVMV EALITSAIES AQKAEEIGLP ANQIILSCKV SQVQELVAVY RELARRCDYA
LHLGLTEAGM GSKGIVASTA ALSVLLQEGI GDTIRISLTP EPGAPREKEV YVGQEILQTM
GLRNFTPMVI ACPGCGRTTS TTFQELAASI QSYLREQMPV WKTAYPGVEE MDVAVMGCIV
NGPGESKHAN IGISLPGSGE SPAAPVFVDG VKVKTLRGEN IAQEFQAIVD EYVRSHYGPD
AKQASQEAVA
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