Gene Rmet_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2103 
Symbol 
ID4038911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2284371 
End bp2285522 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content66% 
IMG OID637977489 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_584251 
Protein GI94311041 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0841326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0433282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAT TGCTTCGCGT AGCCGCCACC CGCACGATCG TTGCCGGCAC CTGTCTCGGC 
CTGCTGGCAG GCTGCTCGTT GTTCAGCAAG GAAAACAAGC ATCCGCCCAC GGAGCTGAAG
CCGATTGCGG CGACGCTGTC GGTCAAGCAG GCCTGGAAGG CCGACGTGGG CAAGGGTGGC
CCGTACGTGA TGTCGCCGGT GGCGTCGGGC AATACGGTTT ATGTGTCGTC GAACGGCGGC
ACCGTGCTGG CGCTCGATGG CGCAACCGGC CAGACGCGCT GGAAGGCGAA GACCGATCTG
GACTTGACGT CCGGCCCCGG CACCGACGGT ACGGTGACGG CCGTGGCGGG TGAAAAGGGC
GCGATCTACG CGTTCGACAC CAGCGGCAAG CAGATCTGGA AGAAACAGGT CAATGGTGAG
GTGCTGTCGG CCCCGCTGGT TGGCAACGGT CTCGTGATCG TTCGTACCAC CGATACGCGC
CTGATCGGCA TGGATGCCAC GACGGGCGAG CGACGCTGGA TCTATCAGCG CACGCAGACC
CCGCTGAACC TGCGTGCGGC CATGGGCATG GTGTTTGCCG GCGACGGCAT CGTCACCGGC
TTCCCGGGCG GCAAGCTCGG CGTGCTCGCC CCGGGCAATG GCGCGCTGCG GTGGGAAAGC
ACCGTGTCGT ACCCAAAGGG CGTCTCGGAG ATCGAGCGTC TGAATGATGT GACCGGCGTG
CCGGCCGTCA ATGGCCGCCA GGTGTGCGCG ACGACGTTCC AGGGGCGCGT GTCGTGCCTG
GAGCTCGCCA ACGGCCAGCC GCAATGGGGC AAGGATTTCT CGTCGCCAAG CGGGCTGGCA
CAGGACGATA CTTCGCTGTA TGCCAGCGAC GAGACGTCGG CGGTGTACGC GTTCGATCGC
CAGAACGGCA ATGAACGCTG GAAGAACACT GAACTGCGGT ACCGTAGTCT CGGTGCGCCC
GTGGCCGTGG GCCGCTCGGT GGTGGTGGGC GACTTCGAGG GCTTCGTCCA CTTCCTGTCG
CGCGAAGACG GCAAGATCCT GGCCCGTATG AAGACCGACG GCAGCGCGGT TACCGCGGCG
CCGGTCATGG CCGGTCAGAC CCTGGTGGTC CAGACCCGCG ATGGCGATAT TTACGGCTTC
GTGCCGGACT GA
 
Protein sequence
MTSLLRVAAT RTIVAGTCLG LLAGCSLFSK ENKHPPTELK PIAATLSVKQ AWKADVGKGG 
PYVMSPVASG NTVYVSSNGG TVLALDGATG QTRWKAKTDL DLTSGPGTDG TVTAVAGEKG
AIYAFDTSGK QIWKKQVNGE VLSAPLVGNG LVIVRTTDTR LIGMDATTGE RRWIYQRTQT
PLNLRAAMGM VFAGDGIVTG FPGGKLGVLA PGNGALRWES TVSYPKGVSE IERLNDVTGV
PAVNGRQVCA TTFQGRVSCL ELANGQPQWG KDFSSPSGLA QDDTSLYASD ETSAVYAFDR
QNGNERWKNT ELRYRSLGAP VAVGRSVVVG DFEGFVHFLS REDGKILARM KTDGSAVTAA
PVMAGQTLVV QTRDGDIYGF VPD