Gene Rmet_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2093 
Symbol 
ID4038901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2273795 
End bp2274229 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID637977479 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_584241 
Protein GI94311031 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0872269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.332036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA GTAGCCGGTT TGCCGTCGCC GTTCACATCC TCACCCTGCT CGCGCAGGCC 
GAAGGACCGG TGCCGTCGTC GATGATCGCC GGCAGCGTGG GAACCAACCC CGCACTCATC
CGGCGCATGA TCGGCGCGCT CACGGAGGCG GGCTTCGTCA CCACGACAAT GGGCAGCACC
GGCGGCGCAA TGCTTACGCG ACCCGCCAGC CAGATCACAT TGCTCGAGGT GTTTCAGGCC
ACGGAGACCA CTGCGCTGAT CACGCTGCAC CAAAGCGCGC CGAATCCTGC TTGCCTGGTG
GGCCGCGAGA TCACCGGCAC CCTGCAGGTG GTCGCCGATC GGGCGCAAGC CGCCATGGAT
GCCACGCTCG CGGAGATCAC GATTGCCAGC ATGCTCGGAG AAGTCGAACA TGCCGCCCGG
CGCCGCAAGC GCTGA
 
Protein sequence
MSTSSRFAVA VHILTLLAQA EGPVPSSMIA GSVGTNPALI RRMIGALTEA GFVTTTMGST 
GGAMLTRPAS QITLLEVFQA TETTALITLH QSAPNPACLV GREITGTLQV VADRAQAAMD
ATLAEITIAS MLGEVEHAAR RRKR