Gene Rmet_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2090 
Symbol 
ID4038897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2269221 
End bp2269955 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID637977475 
Productsilent information regulator protein Sir2 
Protein accessionYP_584238 
Protein GI94311028 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.34038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.342768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCC TCGCCCTTGA GCAGGCGCGT GGCTGGGTTG CCGAGGCCCG TCAGATCTTT 
GTGCTGACGG GTGCCGGGAT TTCCGCGGAG TCCGGTGTGC CGACGTTCCG CGATGCGCTG
ACCGGCCTAT GGGAGCGCTT CGATCCCGAG GAACTGGCGA CGGAAGAAGC GTACCGGCGT
CAACCTGCGC TGGTGTGGCA GTGGTATCAG CACCGGCGCG AGCTGGTGGC GGCGGCCCGG
CCGAATCCAG CCCACCATGC GCTTGCGGTG CTGGCCCGGC TGAAGTCGAT GACGCTAGTG
ACGCAGAATA TCGATGGCCT GCATCAGAAG GCGGGTAGCG AGCAGGTGGT GGAGCTGCAC
GGCAACCTCT TCGCCAACAA ATGGCTTGAT GGCTGTGGTC GTTGCGATAC CGTGCCGCCG
ATTCCGGGCG ATCCCCCGCG ATGCGCGATA TGCGGTGCGA TGATGCGTCC TGGCGTGGTG
TGGTTCGGCG AGGACCTGCC GCGAGTGGCC CGTTTCCGCG CCGACCATGC GGCCGAGTCC
TGTGACCTCT GCCTGGTTGT GGGCACGTCG GGGCTGGTGT ATCCGGCGGC GGCGCTGCCG
GGTGTGGCGA AGGAAAACGG CGCGCGTGTG ATTGTGGTGA ATCCGAAGCC GTCAGCACTG
GACGAGACGG CGGATATCGT CCTGCCCGCG CCGGCGGGTG AATGCCTGCC GTTGCTCTGG
CCGCAGGCAG TCTGA
 
Protein sequence
MDSLALEQAR GWVAEARQIF VLTGAGISAE SGVPTFRDAL TGLWERFDPE ELATEEAYRR 
QPALVWQWYQ HRRELVAAAR PNPAHHALAV LARLKSMTLV TQNIDGLHQK AGSEQVVELH
GNLFANKWLD GCGRCDTVPP IPGDPPRCAI CGAMMRPGVV WFGEDLPRVA RFRADHAAES
CDLCLVVGTS GLVYPAAALP GVAKENGARV IVVNPKPSAL DETADIVLPA PAGECLPLLW
PQAV