Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2089 |
Symbol | |
ID | 4038896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2268201 |
End bp | 2269157 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637977474 |
Product | transaldolase B |
Protein accession | YP_584237 |
Protein GI | 94311027 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.466177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.339985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC TTGAACAACT GAGGCAGTTC ACCACGGTAG TGGCCGACAC CGGCGACTTC CAGTTGATGA AGCAATACAA GCCACAGGAC GCGACTACCA ATCCGTCGCT GATTTTCAAG GCGGTACAGA AGCCGGAATA CCGCCCGCTG CTGGAACAGG CTGTGCGCGA TCACCACGGC AATTCGGGGC TCGATGGCGT CATGGACCAG CTCCTGATCG CATTCGGCTG CGAGATCCTG GCCATCGTGC CCGGCCGCGT GTCGACCGAG GTCGACGCCC GTCTGTCGTT CGATACCGAG GCCACCGTTG CCAAGGCGCG CCACCTGATC GGCCTGTACG AGCAACGTGG CGTGGCACGC GAGCGCGTGC TGATCAAGAT CGCCTCGACA TGGGAAGGCA TCCGCGCTGC CGAGGTCCTG CAACGCGAGA ACATCCGCTG CAACATGACG CTGCTGTTCT CGCTGGCGCA GGCAGTGGCT TGTGCCGAGG CCGGCGCGCA GCTGATCTCC CCGTTCGTGG GCCGCATTCT CGATTGGTAC AAGAAGCAGG CTGGCGAGAA ATGGGACCCC GTGGCGAACG GCGGCGAAAA CGATCCCGGC GTGCGTTCCG TGCGCCAGAT CTATGACTAT TACAAGAAGT TCGGCTACGC GACCGAGGTC ATGGGTGCCA GTTTCCGCGG CACCGATCAG ATCCTGTCGC TGGCAGGCTG CGACCTGCTG ACGATCAGTC CGGAACTGCT CGAGCAGCTT GCAGGCGGAC AGAGTGCCGT TGCGCTCAAG CTGTCCGTGG AACAGGCACA GGCCGGCAAC GTCGCGCGAA TCGCCGCAGA TGAACCCGCC TTCCGCTGGC AACTCAACGA AGATGCGATG GCAACGGAGA AGCTCTCCGA AGGTATCCGC CTGTTTGCAG CCGATGCGGT GAAATTGGAA AAACTCGTCG GCGAACTGGC CAGTTGA
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Protein sequence | MNELEQLRQF TTVVADTGDF QLMKQYKPQD ATTNPSLIFK AVQKPEYRPL LEQAVRDHHG NSGLDGVMDQ LLIAFGCEIL AIVPGRVSTE VDARLSFDTE ATVAKARHLI GLYEQRGVAR ERVLIKIAST WEGIRAAEVL QRENIRCNMT LLFSLAQAVA CAEAGAQLIS PFVGRILDWY KKQAGEKWDP VANGGENDPG VRSVRQIYDY YKKFGYATEV MGASFRGTDQ ILSLAGCDLL TISPELLEQL AGGQSAVALK LSVEQAQAGN VARIAADEPA FRWQLNEDAM ATEKLSEGIR LFAADAVKLE KLVGELAS
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