| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2080 |
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| Symbol | |
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| ID | 4038887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2258237 |
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| End bp | 2259409 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977465 |
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| Product | cytochrome d1, heme region |
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| Protein accession | YP_584228 |
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| Protein GI | 94311018 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.79845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.193812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA CCGCACTTCC CGTCGTGCTG GCACTGAGCG CGCTGCTCGC CGGCTGCGCC
ACCGCGGTAC GTGGCACCGG CGATATGGGC GTCGTGGTCG AGCGCGCAGC CGGCCGCATC
CAGGTCGTGG AAACCTCGGG CATGACCCGA CTGGCCACGA TCGATGGCTT CGGTGACCTG
TCGCACGCCA GCGTGGTCTT CGCGCGCGAC GGCCGGTACG CCTACGTCTT CGGCCGTGAC
GGTGGCCTGA CCCGCGTGGA CCTGCTGAAT GCCAAGGTGA CCCACCGTAC CATCCAGGCA
GGCAACAGCA TCGGCGGCGC CATTACCCAG GATGGCCGCG TGGTGGCCGC GCAGAATTAC
GAGCCCGGTG GCATCAGGTT GTTCGATGCC GCCACGCTCG AACCGCTCGC CGACATCCCC
GCCATCGGCC CAGACGGGCG ACGCTCGAAG GTTGTCGGTC TGGCCGACCT GCCCGGCAAG
CGGCTGGCGG CGAGCCTGTT CGAGGCAGGC GAGATCTGGA TCATCGACGT AGCCGACCCT
CGCCACCCCA AAGTCACCAA GCTGCCAGCA GGCAAGCAGC CTTATGACGG GCTGGTGACG
CCCGACGGCC GTTGGTATCT GGCGGGACTG TTCGGGGAGG ACGGCCTGGC GCTGGTGGAC
CTGTGGCAAT CCCCGCCTGC CGCGCGGCAT GTCCTGTCCG GCTATGGACG TGGCTCCGCA
CCGCTGCCCG TCTACAAGAT GCCGCACCTG CGCGGCTGGG CCATGGCGCA GGGCAAGGCA
TGGCTGCCCG CCATCGGGCG TCATGAAGTG CTCATCGCCG ATACCGCCAA CGGCTGGCAG
GAAGCCGGAC GCGTGGAAGT TGCGGGCCAG CCGGTGTTCG TGATGGCGCA GCCTGACGGA
CGACAGGTCT GGGTGAACTT CGCGTTCCCG AACAACGAAA CCGTCCAGGT CATCGACACA
GCCACCCGGA AGGTCGTGCG CACGCTCAAG CCTTGCCGTG GCGTGCTGCA CATGGAGTTC
ACGCCCAAGG GCGAGGCAGT CTGGCTGTCG TGCCGCGACG ACAATCGCGT GGTGGTCTAC
GACACGACCA GTTACGAGCC GTTGGCCACG CTGCCGGCGG ACCATCCAAG CGGCATCTTC
TTCACCTCGC GCGCGCAGCG CTTCGGGATG TGA
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| Protein sequence | MRRTALPVVL ALSALLAGCA TAVRGTGDMG VVVERAAGRI QVVETSGMTR LATIDGFGDL
SHASVVFARD GRYAYVFGRD GGLTRVDLLN AKVTHRTIQA GNSIGGAITQ DGRVVAAQNY
EPGGIRLFDA ATLEPLADIP AIGPDGRRSK VVGLADLPGK RLAASLFEAG EIWIIDVADP
RHPKVTKLPA GKQPYDGLVT PDGRWYLAGL FGEDGLALVD LWQSPPAARH VLSGYGRGSA
PLPVYKMPHL RGWAMAQGKA WLPAIGRHEV LIADTANGWQ EAGRVEVAGQ PVFVMAQPDG
RQVWVNFAFP NNETVQVIDT ATRKVVRTLK PCRGVLHMEF TPKGEAVWLS CRDDNRVVVY
DTTSYEPLAT LPADHPSGIF FTSRAQRFGM
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