| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2078 |
|---|
| Symbol | |
|---|
| ID | 4038885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2257111 |
|---|
| End bp | 2257845 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637977463 |
|---|
| Product | carbonic anhydrase |
|---|
| Protein accession | YP_584226 |
|---|
| Protein GI | 94311016 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0288] Carbonic anhydrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00878543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.182367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGA TCGAACGTCT GCTCAAGGGC TTCGAACGGT TCCAGCGGCG CTACTTCGAG
GCCAGGCCGG AACTCTTCGA TGCCCTGCGC ACGGGCCAGA AGCCTCAGAC GCTGCTGATC
GGCTGTAGCG ATTCGCGCGT GGACCCGGGC CTGCTGCTCG ACTGCGACCC GGGAGAGCTG
TTCACGGTGC GCAACGTCGC CAACCTCGTA CCGCCGTGCG GGGATGGCGC CAGCGGGCGG
CTCCACGGTG TCTCGGCGGC GATCCAGTTC GCCGTGGAGC AACTGCATGT GGTCCGCATC
ATCGTGATGG GCCACGCTGG ATGTGGCGGC ATCCGTGCTT TGCTGGCCCA TCCGCAAAAC
GACGATACGA ACGCGCCGCA GGACTTTATC GGGCCCTGGG TCCGCATTGC AGGCCCTGCC
CGGCGCATGG TCGAGCAGAC GCTGCCCAAC GCCAGTCCCG CGGAACGGCA GCGCGCATGC
GAACAAGCGG CGATCCTGGT GTCGCTGCGC AATCTCGAGA GTTTTCCGTT CGTCCGCGAG
GCCTGCGAGC GCGGTGCGCT CACGCTGCAT GGCTGGTACT TCGACCTCCA GGCGGGCGCG
CTGCTGGCCT ACTCGGAACG TGCAGACGAC TTCCTGCCGC TGGTCTGCCC TCTGACACCT
GAGGCGCGCC CGCATCGTCA ACCGTCGAAT CGCCCCAGCA TTGACAGCGG TCAAGCCGAA
ATGCTGGGTT CTTAA
|
|---|
| Protein sequence | MHEIERLLKG FERFQRRYFE ARPELFDALR TGQKPQTLLI GCSDSRVDPG LLLDCDPGEL
FTVRNVANLV PPCGDGASGR LHGVSAAIQF AVEQLHVVRI IVMGHAGCGG IRALLAHPQN
DDTNAPQDFI GPWVRIAGPA RRMVEQTLPN ASPAERQRAC EQAAILVSLR NLESFPFVRE
ACERGALTLH GWYFDLQAGA LLAYSERADD FLPLVCPLTP EARPHRQPSN RPSIDSGQAE
MLGS
|
|---|
| |