| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2077 |
|---|
| Symbol | |
|---|
| ID | 4038884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2256415 |
|---|
| End bp | 2257098 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637977462 |
|---|
| Product | respiratory nitrate reductase subunit gamma |
|---|
| Protein accession | YP_584225 |
|---|
| Protein GI | 94311015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2181] Nitrate reductase gamma subunit |
|---|
| TIGRFAM ID | [TIGR00351] respiratory nitrate reductase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0152156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.186259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGG TCCATCAATT TATCTTCGGG ATCTATCCCT ACATCGCAGC CGCCATCTTC
CTGTTCGGCA GCCTGGCGCG CTTCGAGCGC GAGCAGTACA CCTGGAAGTC GGACAGTTCG
CAGATGCTCT ATCGCGGTAA CCTGCGCACC GGCAACATCC TGTTCCACGT GGGCATCCTT
GGCCTGTTCT TCGGCCATCT CGTCGGCCTG CTGACGCCGG TCGTGGTGTG GGACACGCTT
GGCGTGTCGC ATGGCCTCAA GCAGGCCATC GCCATGAGCG CCGGCGGCGT CATGGGCACG
ATGTGCCTGG CCGGCCTGCT GATCCTGCTG CATCGTCGCC TGACCAACGC ACGCGTGTCC
GCCGTCACGC GCTTCGGTGA CAAGGTCCTG CTGCTGTGGC TGCTGGTCAC GCTGCTACTG
GGTCTGTCGA CGATCTTCGA GTCGGCCAGC CATATGGACG GCCACATGAT GGTGCAACTG
ATGACCTGGG CGCAGCACGT CGTCACGCTG CGCGCGGATG CCGCCAGCTA TGTGGCCGAG
GCCCCGCTGC TCTTCAAGGC GCACCTGTTC ATGGGCATCT CGCTGTTCGC GATCTTCCCG
TTCACGCGAC TGGTGCACGT CTGGAGCGGC TTTGCCTCGG TGACCTACCT GGGACGCGCC
TGGCAACTCG TCCGGGGCCG GTAA
|
|---|
| Protein sequence | MNLVHQFIFG IYPYIAAAIF LFGSLARFER EQYTWKSDSS QMLYRGNLRT GNILFHVGIL
GLFFGHLVGL LTPVVVWDTL GVSHGLKQAI AMSAGGVMGT MCLAGLLILL HRRLTNARVS
AVTRFGDKVL LLWLLVTLLL GLSTIFESAS HMDGHMMVQL MTWAQHVVTL RADAASYVAE
APLLFKAHLF MGISLFAIFP FTRLVHVWSG FASVTYLGRA WQLVRGR
|
|---|
| |