| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2074 |
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| Symbol | |
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| ID | 4038881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2250389 |
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| End bp | 2254147 |
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| Gene Length | 3759 bp |
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| Protein Length | 1252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977459 |
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| Product | respiratory nitrate reductase subunit alpha apoprotein |
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| Protein accession | YP_584222 |
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| Protein GI | 94311012 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.393838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.347657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACT TTCTCGATCG ACTGAAGTTC CTGTCGCGCG TGAAGTCCAC CTACTCGGAC
GGACACGGCG CTGTGGTCAA CGAGGACCGC AAGTGGGAGA ACACGTACCG CAGCCGCTGG
CAGCACGACA AGATCGTGCG CTCGACGCAC GGCGTCAACT GCACCGGCTC CTGCTCGTGG
AAGGTCTACG TCAAGAACGG CCTGATTACC TGGGAAACCC AGCAGACCGA CTATCCGCGC
ACGCGCCCCG ATCTGCCCAA CCATGAACCG CGCGGCTGCC CGCGTGGCGC GTCGTACAGC
TGGTACGTCT ACTCCGCGCA GCGGGTGAAG TACCCCATGA TTCGCGGCCG CCTGATGGAA
ATGTGGCGCG AGGCCCGCAA GACGATGGAT CCGATTTCCG CCTGGGAATC GATCAGCCAG
AACCCGGAGA AGGCCCGCCG CTACAAGAGC GTGCGCGGCC AGGGCGGCTT CGTCCGCGCG
GACTGGCAGA CTGCCACCGA GATCATCGCG GCGGCCAATG CCTACACGAT CAAGCAGTAC
GGCCCCGACC GCGTGATCGG CTTCTCGCCG ATTCCAGCCA TGTCGATGGT GTCGTACGCC
GCTGGCGCGC GCTACCTGAG CCTGATCGGC GGCGCCTGCC TGTCCTTCTA CGACTGGTAC
TGCGATCTGC CGCCGGCCAG CCCGCAGATC TGGGGCGAGC AGACGGACGT GCCGGAATCG
GCCGACTGGT ACAACAGCAC CTACCTGATG GTGTGGGGCT CGAACGTGCC GCAGACGCGC
ACGCCTGACG CCCACTTCTA CACCGAGGTG CGGTACAAGG GCACCAAGAC CGTGGCCGTG
TCTTCGGACT TCGGCGAAAT GGTCAAGTTT GGTGACATCT GGCTCGCGCC GAAGCAAGGT
ACCGATGCCG CCCTGGCAAT GGCCATGGGC CACGTGGTGC TCAAGGAGTT CCACGCCACC
GGCAAGTCGG CCTACTTCCG CGACTATGTG AAGCAGTACA CCGACATGCC GCTGCTGGTG
CTGCTGCGCG AGCAGGACGG CACGCTGGTG CCCGATCACT TCCTCCGCGC TTCGCATCTG
GACGGCAATC TCGACCAGGC GAACCATCCC GAATGGAAAA CGCTGGCCAT TGACGACGCC
ACGGGCGAAA TCGTCGCGCC GAATGGCTCG ATCGGCTTCC GCTGGGGCGA AGCCGCCCAC
GACAACGGCG CGAAGGTCGG CCGCTGGAAC CTCGAGATGA AGGATGGCGG CAGCGGCCGC
GAGATCGACC AGCGTCTGTC ACTGATCGGT CATGAGGATG AAGTGGTCGA AGTCGGCTTC
CCGTACTTCG GCGGCGAGCA CGATGCCCTG CTCAAGCGCC GCGTGCCCAC GCGCCGCCTG
ACGCTGGCCG ACGGCACCAC GGTCCACGTG GCCACCGTCT ATGACCTGCA GATGGCCAAC
TACGGCGTCG ACCAGGGCCT TGGTGGCCCG AACGTCGCCA CGTCGTACGA CGACGATGTG
CCCTACACCC CTGCCTGGCA GGAAAAGCAC ACGTCCGTGC CGCGTAACCT CGTCATCCAG
GTCGCCCGCG AGTTCGCCGA CAACGCCGAC CGCACGCAGG GCAAGAGCAT GGTCATCGTT
GGCGCCGCGC TGAATCACTG GTACCACAAC GACATGATTT ACCGCGGCAT CATCAACCTG
TTGATGATGT GCGGCTGCAT CGGCAAGAGC GGTGGCGGCT GGGCGCACTA CGTCGGCCAG
GAAAAGCTGC GGCCGCAGTT CGGCTGGGCG CCGCTGGCGT TCGGGCTGGA CTGGTCGCGC
CCGCCGCGCC ATATGAACGG CACGTCGTTC TTCTACAACC ACACCAGCCA GTGGCGTCAC
GAGAAGCTCG GTGTCGACGA AATCCTCGCG CCGACCGCCG ACCGCGCGCG CTACGACAAG
CTGTCGCTGC TCGACCTCAA CGCCAAGTCC GAACGGATGG GCTGGTTACC ATCCGCGCCG
CAACTGGGCC GGAACCCGCT CGACGTGGTG GCCGAGGCCC GCGCCGCCGG CAAGGACCCG
ATCGCGGATA CCGTGGAGCA ACTAAAGTCC GGCAAGCTGC AGTTCGCCTG CGACGACCCC
GACAATCCCG CCAACTTCCC GCGCAACATG TTCGTGTGGC GCTCGAACAT TCTCGGCAGC
TCCGGCAAGG GCCACGAGTA CTTCCTCAAG TACCTGCTCG GCACGCAGAA CGCCGTGTTC
GGCGATGAGA ACGATGCGAT CAAGCCCAGC GAAGTCACGG TTCGGCCAGC CGCCGAAGGC
AAGCTCGACC TGCTGACCGT GCTCGACTTC CGCATGAGCA CCACCTGCCT CTACGGCGAC
ATCGTGCTGC CGACGGCCAC GTGGTACGAA AAGGACGATC TGAACACGTC CGACATGCAC
CCGTTCATCC ACCCGCTCTC GGAAGCCGTG CAGCCGCTCT GGGAAAGCAA GACGGACTGG
GAAATCTACA AGGCGATCGC GAAGACGTTC AGCGAGATTG CCGGCCCGTA CCTTGGCACA
CGCGAGGACC TGGTCTGCAC CCCGCTGCTG CACGACACCC CGGGTGAACT GGGCCAGCCG
TTCGAGCCGA AGGACTGGAA GCACGGCGAG TGCGACCTGA TCCCGGGCAA GACCGCGCCG
TCGATGACCG TGGTGGAACG CAACTATCAC GACATCTACA AGAAGTTCAC GTCGATCGGC
CCGCTGCTCG ACAAGCTTGG CAACGGCGGC AAGGGCATCA ACTGGAACAC CGAGCACGAA
GTGCACGAGA TCGGCCACCT GAGCAAGACG GTGACCGAGC CTGGCGTCAG CCAGGGCCGT
CCGCGCCTGG AAACCGCGAT CGACGCCGCG GAGATGATCC TGACGTTCGC GCCCGAAACC
AACGGCCACG TGGCCGTCAA GGCCTGGGAC GCGCTGTCGA AGATCACCGG CCGCGACCAC
ACGCATCTGG CCGTCGGCCG CGAGCACGAC AAGATCCGCT TCCGCGACGT GCAGGCCCAG
CCGCGCAAGA TCATCTCGGC GCCGACGTGG TCAGGACTCG AGTCCGAGGA AGTCAGCTAC
AACGCCGGCT ACACCAACGT GCACGAGCTG ATTCCATGGC GCACGCTGAC GGGCCGTCAG
CAGTTCTACC AGGATCACCG CTGGATGCTC GACTTCGGCG AAGGCGCGTG CGTGTACAAA
CCGGCGATCG ACACCAAGAC GATCAGCCCG ATGCTCGGCA AGAAGCCGAA CGGCAACCCC
GAACTGGTGC TGAACTGGAT CACCCCGCAC CAGAAGTGGG GCATCCACTC CACGTACTCC
GACAACCTGC GGATGCTGAC GCTGTCCCGC GGCGGCCCGC ACGTATGGAT CTCGGAAGTG
GAAGCCAAGG CCAACGGCAT TCGCGACAAC GACTGGGTCG AGGTCTTCAA CGTCAACGGC
ACGCTGACGG CGCGGGTGGT CGTATCGCAG CGCGTTCCGC AAGGGATGTG CCTGATGTAC
CACGCCCAGG AAAAGATTGT GAACGTGCCT GGGGCCGAGA CCAGCGGTAT GCGCGGCGGC
ATCCATAACT CGGTCACCCG CGCGGTGACC AAGCCCACGC ACATGATCGG CGGCTATGCG
CAACTGGCCT ACGGCTTCAA CTACTACGGC ACCGTCGGTA GCAACCGCGA CGAGTTCGTG
ATCCTGCGCA AGATGAACAA GGTGGACTGG CTCGACCAGC CGCTACGAGA AGAACGTACC
CCTGCAAACG AAGCAGAAAA GATCGAAGGA GCAAGGTAA
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| Protein sequence | MSHFLDRLKF LSRVKSTYSD GHGAVVNEDR KWENTYRSRW QHDKIVRSTH GVNCTGSCSW
KVYVKNGLIT WETQQTDYPR TRPDLPNHEP RGCPRGASYS WYVYSAQRVK YPMIRGRLME
MWREARKTMD PISAWESISQ NPEKARRYKS VRGQGGFVRA DWQTATEIIA AANAYTIKQY
GPDRVIGFSP IPAMSMVSYA AGARYLSLIG GACLSFYDWY CDLPPASPQI WGEQTDVPES
ADWYNSTYLM VWGSNVPQTR TPDAHFYTEV RYKGTKTVAV SSDFGEMVKF GDIWLAPKQG
TDAALAMAMG HVVLKEFHAT GKSAYFRDYV KQYTDMPLLV LLREQDGTLV PDHFLRASHL
DGNLDQANHP EWKTLAIDDA TGEIVAPNGS IGFRWGEAAH DNGAKVGRWN LEMKDGGSGR
EIDQRLSLIG HEDEVVEVGF PYFGGEHDAL LKRRVPTRRL TLADGTTVHV ATVYDLQMAN
YGVDQGLGGP NVATSYDDDV PYTPAWQEKH TSVPRNLVIQ VAREFADNAD RTQGKSMVIV
GAALNHWYHN DMIYRGIINL LMMCGCIGKS GGGWAHYVGQ EKLRPQFGWA PLAFGLDWSR
PPRHMNGTSF FYNHTSQWRH EKLGVDEILA PTADRARYDK LSLLDLNAKS ERMGWLPSAP
QLGRNPLDVV AEARAAGKDP IADTVEQLKS GKLQFACDDP DNPANFPRNM FVWRSNILGS
SGKGHEYFLK YLLGTQNAVF GDENDAIKPS EVTVRPAAEG KLDLLTVLDF RMSTTCLYGD
IVLPTATWYE KDDLNTSDMH PFIHPLSEAV QPLWESKTDW EIYKAIAKTF SEIAGPYLGT
REDLVCTPLL HDTPGELGQP FEPKDWKHGE CDLIPGKTAP SMTVVERNYH DIYKKFTSIG
PLLDKLGNGG KGINWNTEHE VHEIGHLSKT VTEPGVSQGR PRLETAIDAA EMILTFAPET
NGHVAVKAWD ALSKITGRDH THLAVGREHD KIRFRDVQAQ PRKIISAPTW SGLESEEVSY
NAGYTNVHEL IPWRTLTGRQ QFYQDHRWML DFGEGACVYK PAIDTKTISP MLGKKPNGNP
ELVLNWITPH QKWGIHSTYS DNLRMLTLSR GGPHVWISEV EAKANGIRDN DWVEVFNVNG
TLTARVVVSQ RVPQGMCLMY HAQEKIVNVP GAETSGMRGG IHNSVTRAVT KPTHMIGGYA
QLAYGFNYYG TVGSNRDEFV ILRKMNKVDW LDQPLREERT PANEAEKIEG AR
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