| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2069 |
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| Symbol | |
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| ID | 4038876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2241601 |
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| End bp | 2245551 |
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| Gene Length | 3951 bp |
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| Protein Length | 1316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977454 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_584217 |
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| Protein GI | 94311007 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC AACGCCCCGC CAAACCTGTT CCGTCCCGGC CCGCCGAGGC CAAGACTTCC
CCGGTCCCTC CGAATCCCGC CAAGCGGCCG GCGGAGGCCG CTGCACGCGC GCCTCGCTCG
CCCGGCGGGC CTCGCCAGCC CCGTGCGCCG CAGCCGGCAC GGCTTGCCAA TCCGATACCG
GAAATCACGT TTCCGGAGGC CTTGCCCGTC TCGGCACGGC GCGAAGAGAT CGCCCGGGCA
CTGCAGGCCA ACCAGGTCAT TATCGTTTCC GGCGAAACCG GCTCGGGCAA GACCACCCAG
TTGCCGAAGA TCGCGTTGTC GATCGGGCGG GGCCCGGCAC GCGAGGGCAA GCCCGGCGGC
GGGCTGATCG GCCACACCCA GCCCCGCCGG ATTGCGGCCA CCTCCACGGC CAAGCGGATC
GCACAGGAGC TGGGCACGCC GCTGGGCGAG ACGGTCGGGT ATCAGGTCCG GTTCAACGAC
ACGATGTCGG CCGGGGCGTC GGTCAAGCTG ATGACCGACG GCATCCTGCT GGCCGAGACG
CAGAATGACC CGCTGCTGCG CGCCTACGAC ACGATCATCA TCGACGAGGC GCACGAGCGC
AGCCTCAACA TCGACTTCCT GATCGGCTAC CTGCGCCAGA TCCTGCCGAA GCGGCCGGAT
CTGAAGGTGA TCATCACGTC GGCAACCATC GACGCCAAGC GCTTTGCCGA GCATTTCGCG
CGCAACGGCA AGCCGGCGCC CGTGATCGAG GTCAGTGGCC GGCTCTATCC GGTGGAGGTG
CGCTACCGGC CGATACAGGC GGATGCGCCG GCCGACGGCG CCCCGCGCAC CGAGAAGGCC
CGGGAGCGCG ATCTGTACGA CGGTATCGTC GACGCCGTGG ACGAACTCTG CCGGGTCGGG
CCCGGCGACG TGCTGGTGTT CCTGCCGGGC GAGCGGGAGA TCCGCGAGGC TGCCGAGGCG
CTGCGCAAGC ATCATCCGCC GCATACGGAA ATCCTGCCAC TGTTTGCGCG GCTGTCCGTG
CAGGAGCAGG AGCGTGTGTT CAAACCGTCG AACGCGCGGC GCATCGTGCT GGCCACCAAC
GTGGCGGAGA CGTCGCTGAC GGTGCCTGGC ATCCGCTACG TGGTAGATAC GGGGCTGGCG
CGCGTCAAGC GCTACTCGTA CCGCAACAAG GTCGAGCAAC TCCAGATCGA ATCGATCTCG
CAGGCGGCGG CCAACCAGCG TGCCGGCCGA TGTGGCCGGG TGGCGAACGG TGTCTGCATC
CGCCTGTACG AGGAAAGTGA TTTCCTGGGC CGCGTGCGCT TCACCGATCC GGAAATCCTG
CGCTCGTCGC TGGCAGCGGT CATCCTGCGC ATGAAGGCGC TGCGCCTGAC CAATATCGAG
GCGTTTCCGT TTATCGAGCC GCCGCTGGGC CGTGCCATCG CCGACGGCTA TCAGTTGCTG
CAGGAACTGG GCGCGTTCGA CGAGGCCAAC CAGCTCACCG GCGTTGGCCG CCAGTTGTCC
AAGCTGCCGC TCGACCCCCG CGTGGCGCGG ATGATCCTGG CCGCGCGCGA CCAGCAATGT
CTGCGCGAGG TGCTGATCAT CGCCAGCGCG TTGTCCGTGC AGGACCCGCG AGACCGCCCG
CAGGAGGCCC AGGAGGCCGC CGACCAGGCG CATCGCAAGT TCATGGACGA GAAGTCCGAG
TTCCTGGGCT GGGTCAAGCT GTGGAAATGG TTCGAAGACG CCGTCGCGCA CAAGAAGACC
AACCGGCAGT TGCAGGAGCA GTGCCGTGCC AACTTCCTGT CGCATGTTCG CCTGCGCGAA
TGGCGCGATG TGCATTCGCA GTTGCTGACC ACGGTGACGG AGCAGGGCTG GCGCCTGAAC
GAGAGCGAGC CGACCTTCGA GCAGGTGCAC AAGGCGCTGC TGACCGGCCT GCTCGGCAAC
GTTGGCCTGA AGCTGGATGA ATCCGACGGC AAGGGGCGCG AGTACCTGGG CGCGCGGGGC
ATCAAGTTCC ACCTCTGGCC GGGCTCGCTC ATCGCGCGCA AGGTGGGGCG CTGGATCATC
GCGGCCGAAT TGGTGGAAAC CAGCCGCCTG TACGCGCGCA CGCTGGCCCG TATCGAGCCG
GAATGGGTCG AGCAGGTCGG CAGCCATCTG CTCAAGGTGA GCTGGAGCGA GCCGCACTGG
GAGAAGAAGG CTGGGCAAGT GCTGGCGCTC GAGCGCGGCA CGCTGTACGG CTTGCCCGTG
TACCAGCATC GTCGGGTGCA CTTTGGGCCG ATGAACCCGG CCGAGGCGCG CGAGCTGTTC
ATCCGCCACG CACTGGTGGA AGGCGAGTTC GACACGCGGC TGCCGTTCTT CGCCCACAAC
CAGCGTCTGG TACGCGAGAT CGAGAACCTG GAGCACAAGT CGCGCCGTCA GGACGTGCTG
GTGGACGACG CGCTCATTTT CGCGTTCTAC GATCGCGCGA TTCCCGCCGA CATCCACAAT
CAGGTGGCGT TTGAAAAGTG GTATCAGGCG GAGTCCGCGA AGGATCGCAA ACTCCTGTAC
CTGAATCGCG ACGAGTTGAT GCGGCACGAA GCCGCGGGTA TCACGACGGA CCTGTTCCCG
AAGATCCTGC CGATCGCCGG GATCGATATG GCGCTGACGT ACCACTTCGA ACCGGGCAGC
CATCGCGACG GCGTGACGCT GACGGTGCCG CTGTATGCGC TCAACCAGGT GCGACCCGAG
CGCACCGAGT GGCTCGTGCC TGGCATGATC AAGGAGAAAG TGCATCTGCT GCTGAAATCG
CTGCCACAGA AGCTGCGCCG CCATTGCGTG CCGCTGCCCG ACTACGCAGC CGGGTTTGTC
GACCGCCAGC CGTTCGGGGA GGGAGATCTG CTCGATGTGT TGATCGCCGA CATCCGCGAG
CAGACCGGCA CGATGATCAA GCGTGCGGAC TTCAAGCTCG AGACGCTGCC TGCCCACCAC
GCGATGAATT TCAAGGTGAT CGACGAGCAC GGTCGCCAAC TGGACATGGG CCGCAACCTG
GCCCAGTTGC GTGCGGAGTT CGGCGGTCAG GCGCAGCAGT CGTTCCAGAA CATTGCCGCG
CGCGATGTGC CTGCGGCCGA AGCCGGTCAA TTCGAGAGCC TGACCTCGTG GTCGTTCGGT
GAGTTGCCCG AACTGCTTGA GATCCGCAAG GGCAATCAGA CGCTGTTTGG CTATCCGGCG
CTGGTTGACC ACGGCGATCA CTGTGACGTG GAAGTCTTCG ACGATCCGCA GGAGGCTGCG
CGCATCCATC ATGCCGGACT GCGCCGGTTG TTCGCGCTGC AACTGCGAGA GCAGGTCAAG
TTCATCGAGA AGAACATCCC GAACCTGCAG CAGATGGCGA TGCAGTACAT GACGCTGGGC
ACGCAGGAGG AGTTGCGCAA CCAGATCGTC ATGATGGCGC TGGAACGCGC CTGCCTGCAG
GCGCCCCTGC CGCGCAACGA AGCCGAGTTC AATACCCGCA AGGAAGAAGG GCGGGCGCGG
CTGTCGCTGC TGGCCCAGGA AATCGCGCGG CTGGTGGGCA CAATCCTCGC CGAGTTTGCG
GGGCTGCCGC GCAAGATGCT CCAGGCCAAG CCGTTCGGCT CGGCCTATCA GGATCTGGAA
GGCCAGCTGG CGCGCCTGAT GATGAAGTCG TTCGTGATCG ATACGCCATA TGTCCAGTTG
ACGCACTTTC CGCGTTACCT GAAGGGCATG GCGATGCGGG TGGACAAGCT CAAGGGCGAT
CCGGTCCGTG ACAGCCAGCG CATCCAGGAA ATGACTCCGC TGGTGCAACA GTGGCAGCGT
GCGGAGAAGC AGCTACGGTC GCAGGGCCGA GGCGCTGCCG ATGCCCGTCT CGACGAGTTC
CGCTGGATGC TCGAGGAATT GCGGGTGGCC TTGTTCGCGC AGGAACTGCG CACGCCACAG
CCAATGTCGG TCAAGCGGCT TCAGAAAGTC TGGGAGTCCA TGCAGCGATA G
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| Protein sequence | MSAQRPAKPV PSRPAEAKTS PVPPNPAKRP AEAAARAPRS PGGPRQPRAP QPARLANPIP
EITFPEALPV SARREEIARA LQANQVIIVS GETGSGKTTQ LPKIALSIGR GPAREGKPGG
GLIGHTQPRR IAATSTAKRI AQELGTPLGE TVGYQVRFND TMSAGASVKL MTDGILLAET
QNDPLLRAYD TIIIDEAHER SLNIDFLIGY LRQILPKRPD LKVIITSATI DAKRFAEHFA
RNGKPAPVIE VSGRLYPVEV RYRPIQADAP ADGAPRTEKA RERDLYDGIV DAVDELCRVG
PGDVLVFLPG EREIREAAEA LRKHHPPHTE ILPLFARLSV QEQERVFKPS NARRIVLATN
VAETSLTVPG IRYVVDTGLA RVKRYSYRNK VEQLQIESIS QAAANQRAGR CGRVANGVCI
RLYEESDFLG RVRFTDPEIL RSSLAAVILR MKALRLTNIE AFPFIEPPLG RAIADGYQLL
QELGAFDEAN QLTGVGRQLS KLPLDPRVAR MILAARDQQC LREVLIIASA LSVQDPRDRP
QEAQEAADQA HRKFMDEKSE FLGWVKLWKW FEDAVAHKKT NRQLQEQCRA NFLSHVRLRE
WRDVHSQLLT TVTEQGWRLN ESEPTFEQVH KALLTGLLGN VGLKLDESDG KGREYLGARG
IKFHLWPGSL IARKVGRWII AAELVETSRL YARTLARIEP EWVEQVGSHL LKVSWSEPHW
EKKAGQVLAL ERGTLYGLPV YQHRRVHFGP MNPAEARELF IRHALVEGEF DTRLPFFAHN
QRLVREIENL EHKSRRQDVL VDDALIFAFY DRAIPADIHN QVAFEKWYQA ESAKDRKLLY
LNRDELMRHE AAGITTDLFP KILPIAGIDM ALTYHFEPGS HRDGVTLTVP LYALNQVRPE
RTEWLVPGMI KEKVHLLLKS LPQKLRRHCV PLPDYAAGFV DRQPFGEGDL LDVLIADIRE
QTGTMIKRAD FKLETLPAHH AMNFKVIDEH GRQLDMGRNL AQLRAEFGGQ AQQSFQNIAA
RDVPAAEAGQ FESLTSWSFG ELPELLEIRK GNQTLFGYPA LVDHGDHCDV EVFDDPQEAA
RIHHAGLRRL FALQLREQVK FIEKNIPNLQ QMAMQYMTLG TQEELRNQIV MMALERACLQ
APLPRNEAEF NTRKEEGRAR LSLLAQEIAR LVGTILAEFA GLPRKMLQAK PFGSAYQDLE
GQLARLMMKS FVIDTPYVQL THFPRYLKGM AMRVDKLKGD PVRDSQRIQE MTPLVQQWQR
AEKQLRSQGR GAADARLDEF RWMLEELRVA LFAQELRTPQ PMSVKRLQKV WESMQR
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