Gene Rmet_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2062 
Symbol 
ID4038869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2234351 
End bp2235766 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content60% 
IMG OID637977447 
ProductL-glutamine synthetase 
Protein accessionYP_584210 
Protein GI94311000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00147579 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA GCGTTGCAGA TGTGATGAAG CTCGTGAACG AAAACGACGT GAAGTTCGTC 
GATTTCCGTT TCACGGATAC CAAGGGCAAA GAACAGCACG TCTCGGTGCC GGTGTCGCAC
TTCGACGAAG ACAAGTTCGA GAGCGGCCAC GCCTTTGATG GTTCGTCCAT CGCCGGCTGG
AAGGGTATCG AGGCCTCCGA CATGCTGCTC ATGCCGGATT CGGGTACCGC CTACATCGAC
CCGTTCTACG AAGAGCCGAC GCTGGTGCTG AGCTGCGACG TGATCGAGCC GTCGGACGGC
AAGGGCTACG ACCGCGATCC GCGCTCGATC GCCAAGCGCG CTGAAGCCTA CCTGAAGAGC
ACCGGCCTGG GCGACACCGC CTTCTTCGGT CCGGAACCCG AGTTCTTCAT CTTCGACGGC
GTGACCTGGA ACATCGACAT GCAAGGCTGC TCGGTGAAGA TCCAGTCGGA AGAAGCACCG
TGGTCGTCGG GCAAGGAATT CGAGCACGGC AACAGCGGTC ACCGTCCGGG CAAGAAGGGC
GGCTATTTCC CGGTTGCCCC GATCGACACG TTCCAGGACA TGCGTTCGGA AATGTGCCTG
ATTCTGGAAT CGCTGGGCAT CCCCGTTGAA GTGCACCACC ACGAAGTGGC TGGCCAGGGC
CAGAACGAAA TCGGCACGCG CTTCAGCACG CTGGTGCAAC GCGCCGACTG GACCCAGCTG
CAGAAGTACG TGATTCAGAA CGTCGCGCAC ACCTACGGCA AGACGGCCAC GTTCATGCCG
AAGCCGATCG TGGGCGATAA CGGTTCGGGC ATGCACGTTC ACCAGTCGAT CTGGAAGGAC
GGTCAGAACC TGTTCGCGGG CAACGGCTAC GCCGGCCTGT CGGAATTCGC GCTGTACTAC
ATCGGCGGCA TCATCAAGCA CGCTCGCGCG CTGAACGCCA TCACCAATCC GGGTACGAAC
TCGTACAAGC GTCTGGTGCC GGGCTTCGAG GCACCGGTGA AGCTGGCCTA CTCGGCTCGC
AACCGTTCGG CTTCGATCCG TATTCCGTAC GTGTCCAACC CGAAGGGTCG CCGTATCGAA
ACGCGCTTCC CGGATCCGCT GATGAACCCG TACCTGGGCT TCTCGGCACT GATGATGGCC
GGTCTGGATG GCGTGATGAA CAAGATCCAC CCGGGCGAAG CTGCCGACAA GAACCTGTAC
GATCTGCCGC CCGAAGAAGA CGCGAAGATC CCGACCGTCT GCTCGAGCCT GGATCAGGCC
TTGGAGTACC TGGACAACGA CCGTGAGTTC CTGACCCGCG GTGGTGTGTT CTCGAACTCG
ATGCTCGACG CCTACATCGA ACTGAAGATG GAAGAAGTCA CGCGTTTCCG CATGACGACT
CACCCGATTG AGTTCGACAT GTACTACTCG CTGTAA
 
Protein sequence
MAQSVADVMK LVNENDVKFV DFRFTDTKGK EQHVSVPVSH FDEDKFESGH AFDGSSIAGW 
KGIEASDMLL MPDSGTAYID PFYEEPTLVL SCDVIEPSDG KGYDRDPRSI AKRAEAYLKS
TGLGDTAFFG PEPEFFIFDG VTWNIDMQGC SVKIQSEEAP WSSGKEFEHG NSGHRPGKKG
GYFPVAPIDT FQDMRSEMCL ILESLGIPVE VHHHEVAGQG QNEIGTRFST LVQRADWTQL
QKYVIQNVAH TYGKTATFMP KPIVGDNGSG MHVHQSIWKD GQNLFAGNGY AGLSEFALYY
IGGIIKHARA LNAITNPGTN SYKRLVPGFE APVKLAYSAR NRSASIRIPY VSNPKGRRIE
TRFPDPLMNP YLGFSALMMA GLDGVMNKIH PGEAADKNLY DLPPEEDAKI PTVCSSLDQA
LEYLDNDREF LTRGGVFSNS MLDAYIELKM EEVTRFRMTT HPIEFDMYYS L