Gene Rmet_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2060 
Symbol 
ID4038867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2232479 
End bp2233642 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID637977445 
Productsignal transduction histidine kinase NtrB 
Protein accessionYP_584208 
Protein GI94310998 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.281359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCC TGATTCGTGA AGTGTCCCGC AAGGTAGCAG GAACGGACCG CAAGCCGGAC 
GCCGGCGAGC CGGCCGATCG TGATGCGGAC ATCCTGCCGC TGGGCGGCGC GGCCCTGCAT
CCGGGCCTGG ATGTAGTGGC CAACCCTGTG CTGCTGGTGC GCCAGCCGGG CCTGCGGGTG
ATTTACGCGA ATCCGGCGGC GGAGGCCAGC TTTGCCGTGT CGCGCAAGGC CATGGTGGAA
CTGTCCCTGC CGGACCTGTT CGGGGCGTCG GAAGAACTCG ACAGCATGTT CGAGACGGTG
ATGGCCCGGC AGGTGGACGT GCGCAGGCAG GATCTGGTCC TGCGGCCGCC ATTGCAGGAA
CCGATGCACG CGCACGTGGT AATCGGTGGC GTGGAAGGCT ACGCGAACAC AGCGGTGGTC
GAGGTGCTGC TCAACGAGCA GAAGGTGCGC AGTGACCGCG AGGAGCGCAT TCTTGACCTG
ACCTCGGCGA ACAAGGAACT GATCCGCAAT CTGGCTCACG AGATCAAGAA CCCGCTGGGC
GGGATTCGCG GCGCGGCCCA GTTGCTCGAA TTCGAGCTGC CCGAGCGTGC ACTCCGGGAG
TACACGCAGG TCATCATCAA GGAGTCGGAC CGCCTGCAAA CGCTGGTGGA CCGCCTGCTG
GAGCCGCATC GCCATCCGCA CATCGTCTCG GACCTCAATA TCCACGAGGT GCTGGAGCGT
GTGCGCTCGG TGGTGCTGGC CGAGTTTCCC AACGGGCTGG AAATCGTGCG CGACTACGAT
GCCAGCTTGC CAGAATTGCG CGGCGATATG GAGCAACTGA TCCAGGCCGT GCTGAACATC
GTCCATAACG CCGCCCAGGC GCTGCACGAG CGTGTTGCGC GCGGCGATGC GCAGATCATC
CTGCGGACCC GGGTGGCCCG GCAGGTCACG ATCGCCAAGC GGCTCTTCAA GCTGGCATTG
GATTTGCATG TGATTGACAA CGGCCCGGGA ATCCCCGAGG ACATTCGCGA GCGCATCTTC
TATCCGTTGG TTTCGGGCAG GGATGGCGGT AGCGGGCTCG GTCTCACACT CGCTCAAACC
TTCGTGCAGC AACACGAGGG CTTGATCGAA TGCGAGAGCA AGCCGGGCTG TACCGACTTC
CGTATCCTGT TGCCATTGCA CTAA
 
Protein sequence
MRRLIREVSR KVAGTDRKPD AGEPADRDAD ILPLGGAALH PGLDVVANPV LLVRQPGLRV 
IYANPAAEAS FAVSRKAMVE LSLPDLFGAS EELDSMFETV MARQVDVRRQ DLVLRPPLQE
PMHAHVVIGG VEGYANTAVV EVLLNEQKVR SDREERILDL TSANKELIRN LAHEIKNPLG
GIRGAAQLLE FELPERALRE YTQVIIKESD RLQTLVDRLL EPHRHPHIVS DLNIHEVLER
VRSVVLAEFP NGLEIVRDYD ASLPELRGDM EQLIQAVLNI VHNAAQALHE RVARGDAQII
LRTRVARQVT IAKRLFKLAL DLHVIDNGPG IPEDIRERIF YPLVSGRDGG SGLGLTLAQT
FVQQHEGLIE CESKPGCTDF RILLPLH