Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2052 |
Symbol | ugpC |
ID | 4038859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2223335 |
End bp | 2224438 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977437 |
Product | glycerol-3-phosphate transporter ATP-binding subunit |
Protein accession | YP_584200 |
Protein GI | 94310990 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.117618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC TGTCTCTTCG CAACGTTCAG AAAACCTACG CCGGGGGCAC GCAGGTCGTG CACGGCATCG ACATGGAAAT CGCCGACGGC GAGTTCATCG TGATAGTCGG GCCGTCCGGC TGCGGCAAAT CCACGCTGCT GCGCATGGTG GCCGGCCTCG AGACGATCAC CGGTGGTGAG ATCCATATTG GCGACAAGGT CGTCAACGAT CTGGAGCCGG CCGCGCGTGA TATCGCGATG GTGTTCCAGA ACTACGCGCT CTATCCGCAC ATGAGCGTGT ACGACAACAT GGCGTACGGG CTGAAGATCC GCGGGATGTC GAAGGGCGAG ATCGAGCAGC GCGTCAAGCA TGCGGCCGGC ATCCTGGAAC TTGCGTCGCT GCTCGATCGC AAGCCGCGCG CATTGTCCGG CGGACAGCGG CAGCGTGTGG CGATGGGCCG TGCAATCGTG CGTGAGCCAT CGGTGTTCCT GTTCGACGAG CCGCTGTCGA ACCTCGATGC CAAGCTGCGC GTGCAGATGC GGCTGGAGCT CAAGGATCTG CACCGCCGGC TCAAGACGAC CAGCCTCTAT GTGACGCACG ACCAGGTGGA GGCCATGACG CTGGCGGACC GCATGATGGT GCTCAATGGT GGCCGGGTGG AGCAGATCGG CACGCCGCTG GAAGTCTATG CGCGACCGGC CAGCACGTTC GTCGCCGGCT TCATTGGCTC GCCGCCGATG AATCTGGTGC CGGTGGCGCG GAACGGAAGC GGGCAGGGCG TCGCGCAAAT GCGGGTCCAA CCGAAGGACG GGCAGGCAGC GGCGACGCTG GGACATCTGC CGATGGGGCT GCATCTGCCC GAGCAGGCGC TGATGGGATT GCGTCCCGAA CACATCGAGC CTTGCGCCGT GCACGAGGCC ATCGCCGAAC TGGATGTGAG GGTGGTGGAG GCGCTCGGCG CGGATTCGTT CGCGTACGGA TCGCTCGGCG GCCAGCCCAT CGTGGTCAGG CTCGACAGCC AGACGCAGGT GCGTGCCGGT GACAAGCTGC CGATTACGGC GTCGGCCGAG CATCTGCATT TCTTCGACGT GCAGTCGGGC AAGCGTATCG AGGCTCAGGC ATGA
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Protein sequence | MAKLSLRNVQ KTYAGGTQVV HGIDMEIADG EFIVIVGPSG CGKSTLLRMV AGLETITGGE IHIGDKVVND LEPAARDIAM VFQNYALYPH MSVYDNMAYG LKIRGMSKGE IEQRVKHAAG ILELASLLDR KPRALSGGQR QRVAMGRAIV REPSVFLFDE PLSNLDAKLR VQMRLELKDL HRRLKTTSLY VTHDQVEAMT LADRMMVLNG GRVEQIGTPL EVYARPASTF VAGFIGSPPM NLVPVARNGS GQGVAQMRVQ PKDGQAAATL GHLPMGLHLP EQALMGLRPE HIEPCAVHEA IAELDVRVVE ALGADSFAYG SLGGQPIVVR LDSQTQVRAG DKLPITASAE HLHFFDVQSG KRIEAQA
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