Gene Rmet_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2052 
SymbolugpC 
ID4038859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2223335 
End bp2224438 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID637977437 
Productglycerol-3-phosphate transporter ATP-binding subunit 
Protein accessionYP_584200 
Protein GI94310990 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.117618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC TGTCTCTTCG CAACGTTCAG AAAACCTACG CCGGGGGCAC GCAGGTCGTG 
CACGGCATCG ACATGGAAAT CGCCGACGGC GAGTTCATCG TGATAGTCGG GCCGTCCGGC
TGCGGCAAAT CCACGCTGCT GCGCATGGTG GCCGGCCTCG AGACGATCAC CGGTGGTGAG
ATCCATATTG GCGACAAGGT CGTCAACGAT CTGGAGCCGG CCGCGCGTGA TATCGCGATG
GTGTTCCAGA ACTACGCGCT CTATCCGCAC ATGAGCGTGT ACGACAACAT GGCGTACGGG
CTGAAGATCC GCGGGATGTC GAAGGGCGAG ATCGAGCAGC GCGTCAAGCA TGCGGCCGGC
ATCCTGGAAC TTGCGTCGCT GCTCGATCGC AAGCCGCGCG CATTGTCCGG CGGACAGCGG
CAGCGTGTGG CGATGGGCCG TGCAATCGTG CGTGAGCCAT CGGTGTTCCT GTTCGACGAG
CCGCTGTCGA ACCTCGATGC CAAGCTGCGC GTGCAGATGC GGCTGGAGCT CAAGGATCTG
CACCGCCGGC TCAAGACGAC CAGCCTCTAT GTGACGCACG ACCAGGTGGA GGCCATGACG
CTGGCGGACC GCATGATGGT GCTCAATGGT GGCCGGGTGG AGCAGATCGG CACGCCGCTG
GAAGTCTATG CGCGACCGGC CAGCACGTTC GTCGCCGGCT TCATTGGCTC GCCGCCGATG
AATCTGGTGC CGGTGGCGCG GAACGGAAGC GGGCAGGGCG TCGCGCAAAT GCGGGTCCAA
CCGAAGGACG GGCAGGCAGC GGCGACGCTG GGACATCTGC CGATGGGGCT GCATCTGCCC
GAGCAGGCGC TGATGGGATT GCGTCCCGAA CACATCGAGC CTTGCGCCGT GCACGAGGCC
ATCGCCGAAC TGGATGTGAG GGTGGTGGAG GCGCTCGGCG CGGATTCGTT CGCGTACGGA
TCGCTCGGCG GCCAGCCCAT CGTGGTCAGG CTCGACAGCC AGACGCAGGT GCGTGCCGGT
GACAAGCTGC CGATTACGGC GTCGGCCGAG CATCTGCATT TCTTCGACGT GCAGTCGGGC
AAGCGTATCG AGGCTCAGGC ATGA
 
Protein sequence
MAKLSLRNVQ KTYAGGTQVV HGIDMEIADG EFIVIVGPSG CGKSTLLRMV AGLETITGGE 
IHIGDKVVND LEPAARDIAM VFQNYALYPH MSVYDNMAYG LKIRGMSKGE IEQRVKHAAG
ILELASLLDR KPRALSGGQR QRVAMGRAIV REPSVFLFDE PLSNLDAKLR VQMRLELKDL
HRRLKTTSLY VTHDQVEAMT LADRMMVLNG GRVEQIGTPL EVYARPASTF VAGFIGSPPM
NLVPVARNGS GQGVAQMRVQ PKDGQAAATL GHLPMGLHLP EQALMGLRPE HIEPCAVHEA
IAELDVRVVE ALGADSFAYG SLGGQPIVVR LDSQTQVRAG DKLPITASAE HLHFFDVQSG
KRIEAQA