Gene Rmet_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2040 
Symbol 
ID4038847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2207530 
End bp2209059 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content61% 
IMG OID637977425 
Product4Fe-4S ferredoxin 
Protein accessionYP_584188 
Protein GI94310978 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.75335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.744496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCCTTAACGC CCCCGATCAC TCGGACGATC ACGCCTCGAA CGATCCGTCT 
GCAAGCCAGT CGTCGAGCGA TCGTAACGGC AACACTTGGC GTCCCGCGCC GCCCCCCAAG
GGGGCAGAGA CCACCGAGGA AGCGCTGTAC GAGGTCCGCC GCAAGATCTA TCCGCGCTCG
ACCTCTGGCG CGTTTTCGAG CTGGCGCGTG TGGCTGGTCA TCCTGACGCA GTTGATTTAC
TACGGAACCC CCTGGCTAAA GTGGAATGAT CGCCAGGCCG TGCTGTTCGA TCTCGGCGCG
CGCAAGTTCT ACATCTTCGG TCTCGTGCTG TGGCCGCAGG ATGTGATCTA TCTTGCCGTG
CTGCTGGTCA TTTCTGCGCT ATCGCTATTC CTGTTCACAG CCATCGCCGG ACGCCTGTTC
TGCGGCTACG CCTGTCCCCA AACGGTCTAC ACAGAGATAT TCATGTGGAT CGAGCGACAT
GTCGAAGGGG ATCGCATCGC GCGGATCCGA CTTGACGGCG ATCCCTGGAG CCTGCGCAAG
CTGCGAATCA AGGCGACCAA GCATGTGCTC TGGGTGCTGA TCGCACTGTG GACGGGCTTC
ACGTTTATTG GATATTTCGC GCCGATTCGG GAGCTTGGTA GCGAGGTCCT GCATTTTACG
CTCGGACCCT GGCAGAGTTT CTGGATGCTG TTCTACGCGT TTGCGACCTG GGGCAACGCC
GGATTCATGC GCGAGCAGGT GTGCAAGTAC ATGTGCCCCT ATGCGCGCTT CCAGAGCGTG
ATGGTCGACC GCGATACCTA TGTCGTGACC TATGACGTGG GTCGTGGGGA GCCGCGTGGT
AGCCGTTCCC GCAAGACCGA TCGCCATGCC GCTGGCATTG GCGATTGCGT GAATTGCAGT
ATCTGCGTGC AGGTGTGTCC GACCGGTATC GATATTCGCG ATGGCCTCCA GTACGAGTGC
ATCGGTTGCG GTGCCTGTAT CGACGCGTGC AATCTGGTCA TGGACAAGAT GGAGTACCCG
CGCGGACTGA TCCGATACAC GTCGGAAAAT GCGATGCGCA AGTCCCTGTC GACATCCGAC
GCGCGCAAGC GGCTGCTGCG ACCACGCACG ATCATCTATA CGCTGATCTG GTTGGTTCTG
GCGGCGGGCT TCGTCGCGTC GCTGGCAGTG CGGTCGCCGA TCAAGGTCGA CATCATTCGG
GATCGCGGCG CGCTGGGCCG GGAAGTGGAG GGGCGCTGGA TCGAGAACGT CTATCGGCTC
CAGGTGATCA ACACCACGGA AGCGCCGATG CGGATTCGCG TGGAGGCTGA GGGCGACGAC
CTGACTGGAC TGACGGTCGA GTATGACAAG TCCGCCGAGG CCATGCAGCC AACGTCCAAC
CGGTTGTTGC CGATTCGCAT CCGCGTGCCG ATCGACGATG CCAAGGAAGG CACGCACAAG
ATCAACGTAA CGGTGACGGC GGAGGGCGAG GACGGCCGAG ACGCGCATAT CAGGCAATCC
ACGAGTTTCA TTGTTCCCCG CAATCTGTGA
 
Protein sequence
MSAPLNAPDH SDDHASNDPS ASQSSSDRNG NTWRPAPPPK GAETTEEALY EVRRKIYPRS 
TSGAFSSWRV WLVILTQLIY YGTPWLKWND RQAVLFDLGA RKFYIFGLVL WPQDVIYLAV
LLVISALSLF LFTAIAGRLF CGYACPQTVY TEIFMWIERH VEGDRIARIR LDGDPWSLRK
LRIKATKHVL WVLIALWTGF TFIGYFAPIR ELGSEVLHFT LGPWQSFWML FYAFATWGNA
GFMREQVCKY MCPYARFQSV MVDRDTYVVT YDVGRGEPRG SRSRKTDRHA AGIGDCVNCS
ICVQVCPTGI DIRDGLQYEC IGCGACIDAC NLVMDKMEYP RGLIRYTSEN AMRKSLSTSD
ARKRLLRPRT IIYTLIWLVL AAGFVASLAV RSPIKVDIIR DRGALGREVE GRWIENVYRL
QVINTTEAPM RIRVEAEGDD LTGLTVEYDK SAEAMQPTSN RLLPIRIRVP IDDAKEGTHK
INVTVTAEGE DGRDAHIRQS TSFIVPRNL