| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2031 |
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| Symbol | infB |
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| ID | 4038838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2196681 |
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| End bp | 2199620 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977416 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_584179 |
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| Protein GI | 94310969 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00715867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAGCA CAACAGTTGC CCAACTGGCC GCAGAACTGA GCCGCAGCCC TGCTGCACTG
CTGGAACAAT TGCAGGCAGC TGGGGTGGGC AAAGCAACGC CAGACGACGT CATCACCGAA
TCGGACAAGA CCAGGCTGCT GGATTACCTG AAGCGGTCGC ATGGTCAGTC CGACGACAGC
GCGCGCAAGA AGATCACGCT GACCAAGCGT GAGACTTCCG AGATCCGCCA ATCCGACTCC
ACCGGCAAGA CCCGCACGGT GCAGGTGGAG GTGCGCAAGA AGCGCGTCCT GATCAAGCGT
GACGACGTGG AATCTCACGG CGACGGCGCC GACTCCCAGG AATCGGCCGA GGCCGCTGCC
GAGGAAGTGC GTCGCGATGA GGAACAGCGC CGCGAGCAGG CCGAGGCCCT GGCACGTCAG
GAAGCCGAGG CTCAGGCAGC CCGCGAGGCC GCCGAGCGCG AGGAAGCCGA ACGCCGCGCC
AAGCAGGAAG CCCTGGAGGC CGAACAGCGC CGCCAGGCCG AACTGCTGGC CCAGAAGGCT
GCTGAAGAAG CTGCCGCCGC ACAGGCCGCA GCCGACGCCG CCGAGGAAAC CGCGCGCGAG
AAGGCAGAAG AAGACAAGGC ACGTCTGGCC ACGGAACGCG CGCAAGCGCA GAAAAATGCC
GACGACGCCA AGGCTGCCGT CGACAAGGCG CGCGCCGAGC AGGACAGCGC GAAGGCTGCA
GCCGACAAGG CGCGTGCGGA GCAGGATGCT GCCGCCCGTC GCCGTCGCGA AGCCGCCGAA
GCGGAAGCGC GCGCGATTCA GCAGATGCTG AATGCGCCGC CACGTGTGCT GAAGGCGCCG
TCGGAGCGCA AGGCCGAGGA AAAGAAGGCC GAGCAGACGG GCACGCTGCA CAAGCCGGTG
AAGCCGGCTG GCGCCACGAC CGAAGCGAAG AAGGACGACA AGAAGGCCGC ACCGGCTGCC
ACGACTACCA CGGCTGCCGC TGGCGACAAG AAGGGCGCCA AGGGTGGCAA GACCGGAACC
TGGCAGGATG AAGGCAGCCG CGGCAAGAAG GGCGGTGGCC TGAAGACGCG CGGCGATTCG
TCCGGCGGTG TCGGTGGCTG GCGCAGCGGC CCGCGTGGCC GTGGCGGCAA GCACAATGCC
GACGACGCAC GCAGCAACTT CCAGGCGCCG ACCGAGCCGG TGGTGCGTGA AGTGCACGTG
CCGGAAACCG TCTCGGTGGC CGATCTGGCG CACAAGATGG CCGTGAAGGC ATCCGAGGTC
ATCAAGCAGA TGATGAAGCT CGGCCAGATG GTGACGATCA ACCAGGTGCT GGACCAGGAA
ACCGCCATGA TCGTGGTGGA AGAAATGGGC CACAAGGCGT TCGCCGCCAA GCTGGACGAT
CCTGAAGCGT TGCTGGTGGT GGATGGCGAG GATCACGGCG ATGCCGAGAT GCTGCCGCGT
CCGCCGGTGG TGACGGTGAT GGGCCACGTC GACCACGGCA AGACCTCGCT GCTCGACTAC
ATCCGTCGCA CGAAGGTTGC AGCGGGCGAA GCGGGCGGTA TTACGCAGCA CATCGGTGCC
TACCATGTGG AAACCGATCG CGGCGTGATC ACGTTCCTGG ATACTCCGGG TCACGAGGCC
TTTACGGCCA TGCGTGCCCG CGGTGCCAAG GCTACCGACA TCGTGATTCT GGTAGTGGCC
GCCGATGACG GCGTGATGCC GCAGACCAAG GAAGCGATTG CGCACGCCAA GGCTGCCGGT
GTGCCGATCG TGGTGGCGAT CACCAAGGTC GACAAGCCCG AAGCCAACCC GGACCGCGTC
AAGCAGGAAC TGGTGGCCGA GCAGGTCGTG CCCGAAGAGT ACGGTGGCGA ATCGCCGTTC
GTGCCTGTTT CGGCCAAGAC CGGCCAGGGC ATCGACGATC TGCTCGAAAA CGTGCTGCTG
CAGGCCGAAG TGCTGGAGCT GCGCGCACCG GTGGACGCCC CGGCCAAGGG CCTGGTGGTG
GAAGCCCAGC TCGACAAGGG CAAGGGCCCG ATCGCGACGA TCCTGGTCAG CAGCGGCACG
CTCAAGCGTG GCGATGTGGT GCTGGCTGGT AGCGCCTACG GCCGTGTGCG TGCGATGCTG
GACGAAAACG GCAAGCCCTC CAAGGAAGCT GGCCCGTCGA TCCCGGTGGA AATCCAGGGT
CTGTCGGAAG TGCCCGCCGC CGGTGAGGAA GTGCTGGTGC TGCCGGACGA ACGCAAGGCG
CGCGAAATCG CGCTGTTCCG TCAGGGCAAG TTCCGCGACG TGAAGCTTGC GAAGCAGCAG
GCCGCCAAGC TGGAAACGAT GCTCGAGCAG ATGGCCGAAG GCGAAGTGCA GACGCTGCCG
TTGATCGTGA AGGCCGACGT GCAGGGTTCG CAGGAAGCGC TGGTGCAGTC GCTGCAGAAG
CTGTCGACGA GCGAAGTGCG CGTGCAGATC GTGCACGGTG GCGTGGGTGG CATCTCGGAG
TCGGACGTCA ACCTGGCGAC GGCATCGAAG GCGGTCATCA TCGGCTTCAA CGTGCGTGCC
GACGCAGGCG CGCGCAAGCT GGCCGAGCAC AACGGCATCG ACATCCGCTA CTACAACATC
ATTTACGATG CGGTAGACGA GATCAAGGCG GCCATGTCGG GCATGTTGGC ACCGGAGAAG
CGCGAGACCA CGATCGGTCA GGTGGAAGTC CGTCAGGTCT TCCGCGTGCC GAAGGTGGGC
GCGGTGGCTG GCTGTATGGT CACCGACGGT CTCATCAAGC GGAACTCGAT GGTGCGCGTG
CTGCGCAACA ACGTGGTTAT CCACGATGGC GAACTCGACT CGCTCAAGCG TTTCAAGGAC
GACGTCAAGG AAGTCAAGCA AGGCTTCGAG TGCGGTTTGT CGATCAAGAA CTTCAACGAC
GTTCAGGAAG GCGACCAGCT CGAGGTGTAC GAAATCACAG AGGTGGCGCG TACGCTGTAA
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| Protein sequence | MASTTVAQLA AELSRSPAAL LEQLQAAGVG KATPDDVITE SDKTRLLDYL KRSHGQSDDS
ARKKITLTKR ETSEIRQSDS TGKTRTVQVE VRKKRVLIKR DDVESHGDGA DSQESAEAAA
EEVRRDEEQR REQAEALARQ EAEAQAAREA AEREEAERRA KQEALEAEQR RQAELLAQKA
AEEAAAAQAA ADAAEETARE KAEEDKARLA TERAQAQKNA DDAKAAVDKA RAEQDSAKAA
ADKARAEQDA AARRRREAAE AEARAIQQML NAPPRVLKAP SERKAEEKKA EQTGTLHKPV
KPAGATTEAK KDDKKAAPAA TTTTAAAGDK KGAKGGKTGT WQDEGSRGKK GGGLKTRGDS
SGGVGGWRSG PRGRGGKHNA DDARSNFQAP TEPVVREVHV PETVSVADLA HKMAVKASEV
IKQMMKLGQM VTINQVLDQE TAMIVVEEMG HKAFAAKLDD PEALLVVDGE DHGDAEMLPR
PPVVTVMGHV DHGKTSLLDY IRRTKVAAGE AGGITQHIGA YHVETDRGVI TFLDTPGHEA
FTAMRARGAK ATDIVILVVA ADDGVMPQTK EAIAHAKAAG VPIVVAITKV DKPEANPDRV
KQELVAEQVV PEEYGGESPF VPVSAKTGQG IDDLLENVLL QAEVLELRAP VDAPAKGLVV
EAQLDKGKGP IATILVSSGT LKRGDVVLAG SAYGRVRAML DENGKPSKEA GPSIPVEIQG
LSEVPAAGEE VLVLPDERKA REIALFRQGK FRDVKLAKQQ AAKLETMLEQ MAEGEVQTLP
LIVKADVQGS QEALVQSLQK LSTSEVRVQI VHGGVGGISE SDVNLATASK AVIIGFNVRA
DAGARKLAEH NGIDIRYYNI IYDAVDEIKA AMSGMLAPEK RETTIGQVEV RQVFRVPKVG
AVAGCMVTDG LIKRNSMVRV LRNNVVIHDG ELDSLKRFKD DVKEVKQGFE CGLSIKNFND
VQEGDQLEVY EITEVARTL
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