| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2028 |
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| Symbol | |
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| ID | 4038835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2193553 |
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| End bp | 2195166 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977413 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_584176 |
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| Protein GI | 94310966 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0715517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.28108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATT CCATCACCAC AGTGCCGGAT TCCGGCGCGG CTCCGGCCCC AAAGCCGAAG
CCAGCGCCAG CCCGGCATGC CGCGCCCCCT CCGCTGACGG GCGGCAAGCT CGTCATTGGC
ACCATCGCCC TGTCGCTGGC TACGTTCATG AACGTGCTCG ACTCGTCGAT CGCCAACGTG
TCGATCCCGG CCATCTCGGG CGACCTCGGC GTGTCGCCGA ACCAGGGCAC CTGGGTCATC
ACGTCGTTCG CCGTCGCCAA CGCTATTTCA GTGCCGCTGA CGGGCTGGCT GACCACGCGT
TTCGGTGCCG TGCGATTGTT CGTGCTGTCG ATCTTGCTGT TCGTGCTCTC GTCCTGGCTG
TGCGGCGTGG CGCCGAACCT GGAGACGCTG CTGGCCGCGC GCGTGCTGCA AGGCGCCGTA
GCCGGGCCGA TGATCCCACT GTCGCAGTCG CTGCTGCTGG CCAGCTATCC GGTTGCCAAG
AGTTCGATGG CGCTGGCGCT ATGGGGCATG ACCACACTCG TAGCGCCGAT CATGGGCCCC
CTGCTTGGCG GCTGGATCTC CGACAACATG ACATGGCCGT GGATCTTCTA TATCAACGTG
CCGATCGGCA TCATGACCGC GTATGCCACA TGGGCAATCT ATCGTGATCG CGAAACACCC
ACGAAGATCC TGCCAATCGA CCGCATCGGC CTGGCTCTCC TCGTGATCTG GGTGGGGTCG
ATGCAGCTCA TGCTCGACAA GGGCAAGGAA CTCGACTGGT TCCATTCCTC GATCATCGTG
ACGCTGACGG TGGTGGCGGT AGTCGGATTC CTGTTCTTCC TGATCTGGGA GAACTATGAG
AAGCACCCGA TCGTCGACAT TCACCTGTTC AAGGGACGCA ACTTCGCCGC AGGCGTGGTG
GCAATCTCCG TGGCGTACGG GCTGTTCTTC GGCAACCTGG TGATTCTGCC GCTGTGGCTG
CAGACCATCA TCGGCTACAC CGCGACGGAC GCCGGTCTGG TGATGGCGCC AGTGGGGATC
TTCGCGATCA TCCTGTCGCC AATCATCGGT CGCATCCTGC CGAAGGTCGA CTCTCGCTGG
GTGGCAACCG CTGCGTTTAT TACGTTTGGC GTGGTCAGTT TCATGCGTGC TGGCTTTACC
ACAACCGTTG ATACGCGCGC GCTGATCATC CCTACGCTGA TACAGGGCGC CGCAATGGCA
ATGTTCTTCA TCCCGCTGAC GTCAATCATC CTGTCCGGCC AGCCGGCCGA GAAGATCCCG
GCGGCTTCCG GTTTGTCGAA CTTTGTACGG ATCACGTTCG GCGCGATCGG CGCTTCGATC
TCGACGACGA TCTGGGAGAA CCGCTCGGCG CTGCACCATG CCCAGTTGGT CGAACAGATC
AATCCGTATA ACCCGACGTA CCAGGCACAG CTCGACCACC TGATGTCGAT GGGGATGAAC
CGGATGCAGG CGATCGGCCT GATGGAGCGA AATATCTCGC AGCAGGCATC TATGCTCGGC
GCCAACGACA TCTTCTGGAT TTCCGGCGTG CTGTTCTTCG TGCTGATCGG CTTCGTCTGG
CTGACCAAGC GCGCCAAGGG CGGCGGCGGC GCGGAAGCAG CCGGAGCGCA CTGA
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| Protein sequence | MADSITTVPD SGAAPAPKPK PAPARHAAPP PLTGGKLVIG TIALSLATFM NVLDSSIANV
SIPAISGDLG VSPNQGTWVI TSFAVANAIS VPLTGWLTTR FGAVRLFVLS ILLFVLSSWL
CGVAPNLETL LAARVLQGAV AGPMIPLSQS LLLASYPVAK SSMALALWGM TTLVAPIMGP
LLGGWISDNM TWPWIFYINV PIGIMTAYAT WAIYRDRETP TKILPIDRIG LALLVIWVGS
MQLMLDKGKE LDWFHSSIIV TLTVVAVVGF LFFLIWENYE KHPIVDIHLF KGRNFAAGVV
AISVAYGLFF GNLVILPLWL QTIIGYTATD AGLVMAPVGI FAIILSPIIG RILPKVDSRW
VATAAFITFG VVSFMRAGFT TTVDTRALII PTLIQGAAMA MFFIPLTSII LSGQPAEKIP
AASGLSNFVR ITFGAIGASI STTIWENRSA LHHAQLVEQI NPYNPTYQAQ LDHLMSMGMN
RMQAIGLMER NISQQASMLG ANDIFWISGV LFFVLIGFVW LTKRAKGGGG AEAAGAH
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