Gene Rmet_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2025 
Symbol 
ID4038832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2190079 
End bp2190660 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID637977410 
ProductMarR family transcriptional regulator 
Protein accessionYP_584173 
Protein GI94310963 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.165588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATT TCTATTGTTG CCGTATCATC AGCACATGCT TATATTTGCC CAGGCAAAGA 
TTGCAGCGAC AAGAGATGAC GTCAAACACA CCCGGCGACC TGTTCGATCC GGATCACTAC
GAAATCGGCA AAAGTGTCGG CTATCTGCTC GCCCGCGCCA AGAGCGCGCT CTCCCAGGGC
GTTGAGCAGG AAGTCAGCAG CCTGGACATG ACGCACGCCC AGGCCAGTTG CCTGATGATG
CTGGCCAAGG GCGAGGCCAC AACGGTGACC GACCTGGCCC GCAATCTCAA TACAGATGCC
GGCTCGGTGA CCCGCCTCCT GAGCCGCATG GAAAAGCGCG GCCTGATCGA ACGCACGCGG
CGCGACGATG ATCGCCGCGT GGTAGATCTG TCGCTGACAG CCGAAGGCGA AGCCATGGTC
GAAAAACTGC CCGTGGTGTT TTGCAATGTG ATGCGCCGAC ACTTCGTGGG GTTCAGCCAG
GAAGAAATCG AGACCCTGCG CGACATGTTG CTAAGGCTGA TCGCCAACAA CGGTGGCATT
GGGTCGGCGG CCAGTTGTCC GCTCGACAGG AACACAGGAT AG
 
Protein sequence
MANFYCCRII STCLYLPRQR LQRQEMTSNT PGDLFDPDHY EIGKSVGYLL ARAKSALSQG 
VEQEVSSLDM THAQASCLMM LAKGEATTVT DLARNLNTDA GSVTRLLSRM EKRGLIERTR
RDDDRRVVDL SLTAEGEAMV EKLPVVFCNV MRRHFVGFSQ EEIETLRDML LRLIANNGGI
GSAASCPLDR NTG