Gene Rmet_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2022 
Symbol 
ID4038829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2185909 
End bp2187060 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID637977407 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_584170 
Protein GI94310960 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.195874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTGCC GTGGCAGGCG CTTTGGCGGG TCTGTCGTAG AATCGCTGCC TGCAATGATG 
GAGACAGAAA TGACGGAGTT TGTATCGACC CAGGTGCAGG GCGGCGTGGC GTATCTGACA
CTGACCCGGC CGCAGGCCCT CAACGCGCTG TCGCTCGAGA TGATTCGCGC GATCACCGGT
GCGCTGCAAA GCTGGGAGAA CGATCCCGCA GTCCACGCGA TGGTAGTGGC TGGCGCGGGC
GGCAAGGCAT TCTGCGCCGG CGGCGATATC CGCTGGTTCT ACCAGGCGCA CCAGGCGAAC
GATCCGCTGC TGGATCAGTT CTTCGTTGAG GAATACGCGC TCAACCATCT GATTCATCGC
TATGCCAAGC CTTACATCGC GCTGATGGAT GGCGTGGTCA TGGGCGGTGG TATGGGGATC
TCGCAGGGCG CGCGGCTGCG CATCGTCACC GAGCGGACGA AAATGGCGAT GCCGGAGACC
AATATCGGTC TGTTCCCCGA TGTTGGCGGT GGATGGTTCC TGGCACGCAC GCAAGGTCAT
ATCGGCGAGT ACCTGGGCCT TACCGGCGCG GTGATCGGCG CGGCCGATGC TATTTACGCG
AAGCTGGCCG ATGCCTATCT GCCAACGAAC GCGATCGCCG AGATGGTTGC ATCGCTGCAG
GCGCGGCAGT TCACCAGTGG CGAAGCGGTA CTCGAGCAGA TTGCGTCGTT CACGCGCCAG
CACGCCGACG CCTGCGTACC ATCCACCAGC CAGCTGGCTT CGAATGCTGC CCTGATCGAT
ACCTTGTTCG CAGGCGCCTC CGCACAGGCG ATCCTGGCAG CTGTCAGCGA CGCCGAAGGC
GATTGGGCCG CGCAAACCGC CGCCACGCTG CGTAGCCGCT CACCGCTGAT GCTCTGCGTC
ACGCTCGAAC AGATCCGCCG TGCTCGCACG ATGTCGCTCG AAGATGAGCT GCGGATGGAG
CTCGACATGA TGCATGACGT GTTCCGTCAC GGCGACGGCA TCGAGGGAAT TCGCGCGCTG
GTGATCGACA AGGACCACCA GCCGAAGTGG AATCCGCCAC GCCTGGACGA GGTGAGTGGG
GCACGCGTGC GTGCGTTCTT CGATAGTCCA TGGCGCAAGG ATGACCATCC CTTGGCTACG
CTGGGCGCGT AA
 
Protein sequence
MLCRGRRFGG SVVESLPAMM ETEMTEFVST QVQGGVAYLT LTRPQALNAL SLEMIRAITG 
ALQSWENDPA VHAMVVAGAG GKAFCAGGDI RWFYQAHQAN DPLLDQFFVE EYALNHLIHR
YAKPYIALMD GVVMGGGMGI SQGARLRIVT ERTKMAMPET NIGLFPDVGG GWFLARTQGH
IGEYLGLTGA VIGAADAIYA KLADAYLPTN AIAEMVASLQ ARQFTSGEAV LEQIASFTRQ
HADACVPSTS QLASNAALID TLFAGASAQA ILAAVSDAEG DWAAQTAATL RSRSPLMLCV
TLEQIRRART MSLEDELRME LDMMHDVFRH GDGIEGIRAL VIDKDHQPKW NPPRLDEVSG
ARVRAFFDSP WRKDDHPLAT LGA