| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1997 |
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| Symbol | |
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| ID | 4038803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2167506 |
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| End bp | 2168345 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977381 |
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| Product | site specific recombinase |
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| Protein accession | YP_584145 |
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| Protein GI | 94310935 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.151252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGGG CCCGAAACCG GGTAGATATC GACCGCGACT TCCTGCGCGG CCTGAGTGCG
ACCGGCGCGC ACCAAGAGTA CGCCGACTCG ACCCTGAGCG GCTTTGGCGT GCGTGTCACG
CCTGCCGGCG CCATCCAATA CACGCTGCGT TACCGCAAGC CTGACGGCAA GTTCGGGCGC
ACGAAGATAG GCACCTATCC CGCCATGACC GCCACGCAGG CGCGTAAGGC GGCAAAAGAC
CAACTGGAGT TGACCGACCG CAAGGGGGAT GCCCTGTCGG TGCTGGCCGA GCGCCGAAAG
AAGCGCGACG ACGCCCACCG CATTGCCGGG GTGCCGACCT TGCGCACCTT TCTGGACGGG
GACTATACGG ATTGGCTGAT AACCAACCGC AAGACCGGCG CCGACTTGGC CGACCTCATC
CGCATGGCGT TTGCCGGCCT GCTGGACAAG CGCCTGGACG ATGTGACCCC GTGGGCGCTG
GAGCGCTGGA AGCACGACGA GGCGAAAAAA GGCAATGTCG CGGCGACGGC GGCGCGCAAG
CTGACCGCGC TGCAAGGGCT CTACCGCGTC GCCATGCTGG CCGGTCACGT CTCGGAAAAC
CCGGTAAAGG GTGTCGAATA TGACGGCACG AGCGAAGAGG TGGTGCGCTT CCTGTCGCCG
GACGAGCGCG CGCGCCTATA TATAGCACTC GCCGCCCGGG AAGACGAAAT GCGCGACGCC
CGCGACCGCG CGAACGACCA CCGCAACGTG CGCCGCCGCC CGCTCATGCC GAGCCTGCGC
GATGCTGCCT TTACCGACTA CCTGCGCCCC GCCGTGCTGG TCAGCCTGAA TTGTGCGTGA
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| Protein sequence | MQRARNRVDI DRDFLRGLSA TGAHQEYADS TLSGFGVRVT PAGAIQYTLR YRKPDGKFGR
TKIGTYPAMT ATQARKAAKD QLELTDRKGD ALSVLAERRK KRDDAHRIAG VPTLRTFLDG
DYTDWLITNR KTGADLADLI RMAFAGLLDK RLDDVTPWAL ERWKHDEAKK GNVAATAARK
LTALQGLYRV AMLAGHVSEN PVKGVEYDGT SEEVVRFLSP DERARLYIAL AAREDEMRDA
RDRANDHRNV RRRPLMPSLR DAAFTDYLRP AVLVSLNCA
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